RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 MS4A13Q5J8X5 152 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 AGBL4Q5VU57 503 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 NADSYN1Q6IA69 706 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 MSANTD2Q6P1R3 559 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 GUSBP11Q6P575 273 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 MMS22LQ6ZRQ5 1243 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 UNC13DQ70J99 1090 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 RAB11FIP2Q7L804 512 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 BHLHA9Q7RTU4 235 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 STRA8Q7Z7C7 330 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 ZZZ3Q8IYH5 903 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 APCDD1Q8J025 514 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 SIX6OS1Q8N1H7 587 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 CFAP52Q8N1V2 620 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 SCML4Q8N228 414 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 PDILTQ8N807 584 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 IQUBQ8NA54 791 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 ATL2Q8NHH9 583 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 BMFQ96LC9 184 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 C7orf25Q9BPX7 421 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 SSBP3Q9BWW4 388 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-239ENST00000556315 STRADBQ9C0K7 418 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 CNGB3Q9NQW8 809 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 ANAPC2Q9UJX6 822 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 SARDHQ9UL12 918 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 SMC3Q9UQE7 1217 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 ATP8A1Q9Y2Q0 1164 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 ASB1Q9Y576 335 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 MORC2Q9Y6X9 1032 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-239ENST00000556315 AHCTF1Q8WYP5 2266 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 USP9XQ93008 2570 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-239ENST00000556315 hCG_2014768A0A024R1R8 64 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 SPTY2D1-AS1A0A0U1RR47 76 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 PVALEFA0A1B0GWK0 134 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 TULP2O00295 520 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 NTN3O00634 580 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-239ENST00000556315 MUSKO15146 869 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 MATN3O15232 486 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 MAPK13O15264 365 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 ULK1O75385 1050 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 PCDH8O95206 1070 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 CD82P27701 267 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 RABIFP47224 123 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 GCLMP48507 274 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 STK19P49842 368 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-239ENST00000556315 VAMP7P51809 220 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 PDX1P52945 283 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 PLK1P53350 603 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 METAP1P53582 386 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 RAD23BP54727 409 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 CLDN2P57739 230 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 TAS2R38P59533 333 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 CEBPZQ03701 1054 aaKnown RBP4.92□□□□□ -1.62
ATXN3-239ENST00000556315 ADIGQ0VDE8 80 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 DBPQ10586 325 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-239ENST00000556315 SRSF6Q13247 344 aaKnown RBP4.92□□□□□ -1.62
ATXN3-239ENST00000556315 FZD2Q14332 565 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 NUMA1Q14980 2115 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 DLG2Q15700 870 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 DEFB133Q30KQ1 61 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 PRR31Q5SQ13 230 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 C1orf220Q5T0J3 134 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 PIP5KL1Q5T9C9 394 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 CD276Q5ZPR3 534 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 KRTAP5-3Q6L8H2 238 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 ESRP1Q6NXG1 681 aaKnown RBP4.92□□□□□ -1.62
ATXN3-239ENST00000556315 BORAQ6PGQ7 559 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 CRTC1Q6UUV9 634 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 GCNT7Q6ZNI0 430 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 PARGQ86W56 976 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 SLC22A18ASQ8N1D0 253 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 KYQ8NBH2 561 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 SLC4A11Q8NBS3 891 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 ZNF548Q8NEK5 533 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-239ENST00000556315 TMIEQ8NEW7 156 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 SPATA20Q8TB22 786 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 LMX1AQ8TE12 382 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 TAS1R2Q8TE23 839 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 IRGQQ8WZA9 623 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 KLK6Q92876 244 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 ERCC4Q92889 916 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-239ENST00000556315 TMEM159Q96B96 161 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 TMX3Q96JJ7 454 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 FEM1CQ96JP0 617 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 MYOCQ99972 504 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 CCDC3Q9BQI4 270 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 FUCA2Q9BTY2 467 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 B3GNT4Q9C0J1 378 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 SLC39A2Q9NP94 309 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 DYRK4Q9NR20 520 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 DLL4Q9NR61 685 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 CISHQ9NSE2 258 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 SPASTQ9UBP0 616 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 HESX1Q9UBX0 185 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 TUBD1Q9UJT1 453 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 KIAA1257Q9ULG3 409 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 PADI4Q9UM07 663 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 FRMD4BQ9Y2L6 1034 aa4.92□□□□□ -1.62
ATXN3-239ENST00000556315 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-239ENST00000556315 PIEZO2Q9H5I5 2752 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms