RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 TAAR2Q9P1P5 351 aa18.31■□□□□ 0.52
NEDD1-208ENST00000555806 SATB2Q9UPW6 733 aa18.31■□□□□ 0.52
NEDD1-208ENST00000555806 URB1O60287 2271 aaKnown RBP18.31■□□□□ 0.52
NEDD1-208ENST00000555806 DSPP15924 2871 aaKnown RBP18.31■□□□□ 0.52
NEDD1-208ENST00000555806 RCCD1A6NED2 376 aa18.3■□□□□ 0.52
NEDD1-208ENST00000555806 NTN3O00634 580 aaPredicted RBP18.3■□□□□ 0.52
NEDD1-208ENST00000555806 PMPCBO75439 489 aa18.3■□□□□ 0.52
NEDD1-208ENST00000555806 PIRTP0C851 137 aa18.3■□□□□ 0.52
NEDD1-208ENST00000555806 ADCY8P40145 1251 aa18.3■□□□□ 0.52
NEDD1-208ENST00000555806 EIF2S3P41091 472 aaKnown RBP18.3■□□□□ 0.52
NEDD1-208ENST00000555806 CTBSQ01459 385 aa18.3■□□□□ 0.52
NEDD1-208ENST00000555806 BIRC2Q13490 618 aa18.3■□□□□ 0.52
NEDD1-208ENST00000555806 HLTFQ14527 1009 aaKnown RBP eCLIP18.3■□□□□ 0.52
NEDD1-208ENST00000555806 SLC14A2Q15849 920 aa18.3■□□□□ 0.52
NEDD1-208ENST00000555806 CCDC181Q5TID7 509 aa18.3■□□□□ 0.52
NEDD1-208ENST00000555806 FOXR1Q6PIV2 292 aa18.3■□□□□ 0.52
NEDD1-208ENST00000555806 RAD9BQ6WBX8 426 aa18.3■□□□□ 0.52
NEDD1-208ENST00000555806 GALNT13Q8IUC8 556 aa18.3■□□□□ 0.52
NEDD1-208ENST00000555806 CCNJLQ8IV13 435 aa18.3■□□□□ 0.52
NEDD1-208ENST00000555806 ACRBPQ8NEB7 543 aa18.3■□□□□ 0.52
NEDD1-208ENST00000555806 CALR3Q96L12 384 aaKnown RBP18.3■□□□□ 0.52
NEDD1-208ENST00000555806 TEKT5Q96M29 485 aa18.3■□□□□ 0.52
NEDD1-208ENST00000555806 HEMGNQ9BXL5 484 aa18.3■□□□□ 0.52
NEDD1-208ENST00000555806 LRRN3Q9H3W5 708 aa18.3■□□□□ 0.52
NEDD1-208ENST00000555806 ZFYVE1Q9HBF4 777 aa18.3■□□□□ 0.52
NEDD1-208ENST00000555806 UBP1Q9NZI7 540 aa18.3■□□□□ 0.52
NEDD1-208ENST00000555806 KLHL8Q9P2G9 620 aaPredicted RBP18.3■□□□□ 0.52
NEDD1-208ENST00000555806 LRIT1Q9P2V4 623 aa18.3■□□□□ 0.52
NEDD1-208ENST00000555806 SHOC2Q9UQ13 582 aa18.3■□□□□ 0.52
NEDD1-208ENST00000555806 RNF215Q9Y6U7 377 aa18.3■□□□□ 0.52
NEDD1-208ENST00000555806 RGSL1A5PLK6 1076 aa18.29■□□□□ 0.52
NEDD1-208ENST00000555806 D6RAR5 112 aa18.29■□□□□ 0.52
NEDD1-208ENST00000555806 MTSS1O43312 755 aa18.29■□□□□ 0.52
NEDD1-208ENST00000555806 RBMS1P29558 406 aaKnown RBP18.29■□□□□ 0.52
NEDD1-208ENST00000555806 ACTR1BP42025 376 aa18.29■□□□□ 0.52
NEDD1-208ENST00000555806 PDX1P52945 283 aa18.29■□□□□ 0.52
NEDD1-208ENST00000555806 MAZP56270 477 aaKnown RBP18.29■□□□□ 0.52
NEDD1-208ENST00000555806 ACTR1AP61163 376 aa18.29■□□□□ 0.52
NEDD1-208ENST00000555806 PEX6Q13608 980 aa18.29■□□□□ 0.52
NEDD1-208ENST00000555806 PPP2R5EQ16537 467 aa18.29■□□□□ 0.52
NEDD1-208ENST00000555806 HENMT1Q5T8I9 393 aaKnown RBP18.29■□□□□ 0.52
NEDD1-208ENST00000555806 ALS2CLQ60I27 953 aa18.29■□□□□ 0.52
NEDD1-208ENST00000555806 KIAA1328Q86T90 577 aa18.29■□□□□ 0.52
NEDD1-208ENST00000555806 SCARF2Q96GP6 870 aaPredicted RBP18.29■□□□□ 0.52
NEDD1-208ENST00000555806 COX14Q96I36 57 aa18.29■□□□□ 0.52
NEDD1-208ENST00000555806 ZNF578Q96N58 590 aaPredicted RBP18.29■□□□□ 0.52
NEDD1-208ENST00000555806 WDR24Q96S15 920 aa18.29■□□□□ 0.52
NEDD1-208ENST00000555806 GPR63Q9BZJ6 419 aa18.29■□□□□ 0.52
NEDD1-208ENST00000555806 EPB41L5Q9HCM4 733 aa18.29■□□□□ 0.52
NEDD1-208ENST00000555806 APPL1Q9UKG1 709 aa18.29■□□□□ 0.52
NEDD1-208ENST00000555806 REXO2Q9Y3B8 237 aaKnown RBP18.29■□□□□ 0.52
NEDD1-208ENST00000555806 ZNF711Q9Y462 761 aa18.29■□□□□ 0.52
NEDD1-208ENST00000555806 PLEKHM1Q9Y4G2 1056 aa18.29■□□□□ 0.52
NEDD1-208ENST00000555806 DUSP10Q9Y6W6 482 aa18.29■□□□□ 0.52
NEDD1-208ENST00000555806 FAM208BQ5VWN6 2430 aa18.28■□□□□ 0.52
NEDD1-208ENST00000555806 A0A1W2PQM1 296 aa18.28■□□□□ 0.52
NEDD1-208ENST00000555806 MACROD2A1Z1Q3 448 aa18.28■□□□□ 0.52
NEDD1-208ENST00000555806 FADS2P1A8MWK0 482 aa18.28■□□□□ 0.52
NEDD1-208ENST00000555806 F5H423 210 aaPredicted RBP18.28■□□□□ 0.52
NEDD1-208ENST00000555806 NUDT21O43809 227 aaKnown RBP18.28■□□□□ 0.52
NEDD1-208ENST00000555806 NDST3O95803 873 aa18.28■□□□□ 0.52
NEDD1-208ENST00000555806 ATP1A1P05023 1023 aaKnown RBP18.28■□□□□ 0.52
NEDD1-208ENST00000555806 FGF1P05230 155 aa18.28■□□□□ 0.52
NEDD1-208ENST00000555806 PNLIPP16233 465 aa18.28■□□□□ 0.52
NEDD1-208ENST00000555806 NFKB1P19838 968 aa18.28■□□□□ 0.52
NEDD1-208ENST00000555806 ITPKBP27987 946 aa18.28■□□□□ 0.52
NEDD1-208ENST00000555806 CTNNA1P35221 906 aaKnown RBP18.28■□□□□ 0.52
NEDD1-208ENST00000555806 TNNT3P45378 269 aaPredicted RBP18.28■□□□□ 0.52
NEDD1-208ENST00000555806 VAV2P52735 878 aa18.28■□□□□ 0.52
NEDD1-208ENST00000555806 PCBP4P57723 403 aaKnown RBP18.28■□□□□ 0.52
NEDD1-208ENST00000555806 CCDC173Q0VFZ6 552 aa18.28■□□□□ 0.52
NEDD1-208ENST00000555806 WASHC5Q12768 1159 aa18.28■□□□□ 0.52
NEDD1-208ENST00000555806 BBS12Q6ZW61 710 aa18.28■□□□□ 0.52
NEDD1-208ENST00000555806 SPRED1Q7Z699 444 aa18.28■□□□□ 0.52
NEDD1-208ENST00000555806 PDZD3Q86UT5 571 aa18.28■□□□□ 0.52
NEDD1-208ENST00000555806 WDR36Q8NI36 951 aaKnown RBP18.28■□□□□ 0.52
NEDD1-208ENST00000555806 TADA1Q96BN2 335 aa18.28■□□□□ 0.52
NEDD1-208ENST00000555806 QKIQ96PU8 341 aaKnown RBP eCLIP18.28■□□□□ 0.52
NEDD1-208ENST00000555806 BAG1Q99933 345 aaPredicted RBP18.28■□□□□ 0.52
NEDD1-208ENST00000555806 SPATA16Q9BXB7 569 aa18.28■□□□□ 0.52
NEDD1-208ENST00000555806 FOXP3Q9BZS1 431 aa18.28■□□□□ 0.52
NEDD1-208ENST00000555806 MAGEE1Q9HCI5 957 aa18.28■□□□□ 0.52
NEDD1-208ENST00000555806 THSD1Q9NS62 852 aa18.28■□□□□ 0.52
NEDD1-208ENST00000555806 FAM153AQ9UHL3 310 aa18.28■□□□□ 0.52
NEDD1-208ENST00000555806 ZNHIT2Q9UHR6 403 aa18.28■□□□□ 0.52
NEDD1-208ENST00000555806 OAS3Q9Y6K5 1087 aaKnown RBP18.28■□□□□ 0.52
NEDD1-208ENST00000555806 CCDC187A0A096LP49 1063 aa18.27■□□□□ 0.52
NEDD1-208ENST00000555806 RHPN2P1A8MT19 583 aa18.27■□□□□ 0.52
NEDD1-208ENST00000555806 BTNL10A8MVZ5 291 aa18.27■□□□□ 0.52
NEDD1-208ENST00000555806 HACD1B0YJ81 288 aa18.27■□□□□ 0.52
NEDD1-208ENST00000555806 H7C0C1 242 aa18.27■□□□□ 0.52
NEDD1-208ENST00000555806 DXOO77932 396 aaKnown RBP18.27■□□□□ 0.52
NEDD1-208ENST00000555806 ECEL1O95672 775 aa18.27■□□□□ 0.52
NEDD1-208ENST00000555806 CD68P34810 354 aaPredicted RBP18.27■□□□□ 0.52
NEDD1-208ENST00000555806 ATP5OP48047 213 aa18.27■□□□□ 0.52
NEDD1-208ENST00000555806 INHBCP55103 352 aa18.27■□□□□ 0.52
NEDD1-208ENST00000555806 COPS2P61201 443 aa18.27■□□□□ 0.52
NEDD1-208ENST00000555806 PYCR3Q53H96 274 aa18.27■□□□□ 0.52
NEDD1-208ENST00000555806 ZNF569Q5MCW4 686 aa18.27■□□□□ 0.52
NEDD1-208ENST00000555806 PID1Q7Z2X4 250 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms