RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 DOLKQ9UPQ8 538 aa12.36□□□□□ -0.43
TRAPPC6B-205ENST00000555269 ST14Q9Y5Y6 855 aa12.36□□□□□ -0.43
TRAPPC6B-205ENST00000555269 ACACBO00763 2458 aa12.36□□□□□ -0.43
TRAPPC6B-205ENST00000555269 ASPMQ8IZT6 3477 aa12.36□□□□□ -0.43
TRAPPC6B-205ENST00000555269 FADS2P1A8MWK0 482 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 PDE2AO00408 941 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 ATP1A1P05023 1023 aaKnown RBP12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 CCDC175P0C221 793 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 TEAD1P28347 426 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 GNPDA1P46926 289 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 INSM1Q01101 510 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 TARDBPQ13148 414 aaKnown RBP eCLIP12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 KLF1Q13351 362 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 SPARCL1Q14515 664 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 SLC14A2Q15849 920 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 PERM1Q5SV97 790 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 C6orf132Q5T0Z8 1188 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 ZNF648Q5T619 568 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 MEI1Q5TIA1 1274 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 ALS2CLQ60I27 953 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 UNQ6494/PRO21346Q6UXR6 183 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 ADAMTSL4Q6UY14 1074 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 MARK2Q7KZI7 788 aaKnown RBP12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 ZNF765Q7L2R6 523 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 TMPRSS12Q86WS5 348 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 NRROSQ86YC3 692 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 CDKL3Q8IVW4 592 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 FAM71DQ8N9W8 422 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 FAM46DQ8NEK8 389 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 IPMKQ8NFU5 416 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 IFI44Q8TCB0 444 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 HIC2Q96JB3 615 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 TBATAQ96M53 351 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 APOL2Q9BQE5 337 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 ARFGAP3Q9NP61 516 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 SPATS2LQ9NUQ6 558 aaKnown RBP12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 PKD2L2Q9NZM6 624 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 DNPEPQ9ULA0 475 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 PADI4Q9UM07 663 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 ZNF711Q9Y462 761 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 PRKAB1Q9Y478 270 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 GPSM3Q9Y4H4 160 aa12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 OAS3Q9Y6K5 1087 aaKnown RBP12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 GOLGA4Q13439 2230 aaKnown RBP12.35□□□□□ -0.43
TRAPPC6B-205ENST00000555269 KNTC1P50748 2209 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 EME2A4GXA9 379 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 TRABD2BA6NFA1 517 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 BUD23O43709 281 aaKnown RBP12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 OPA1O60313 960 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 ASMTLO95671 621 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 EPOP01588 193 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 BPIP17213 487 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 AK4P27144 223 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 PSMB4P28070 264 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 DUSP3P51452 185 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 E2F1Q01094 437 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 MPP3Q13368 585 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 ILKQ13418 452 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 CAMK2BQ13554 666 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 PTPRCAPQ14761 206 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 RPS6KA1Q15418 735 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 NR0B2Q15466 257 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 SLC1A5Q15758 541 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 HENMT1Q5T8I9 393 aaKnown RBP12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 HES3Q5TGS1 186 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 LVRNQ6Q4G3 990 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 EFL1Q7Z2Z2 1120 aaKnown RBP12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 GKN2Q86XP6 184 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 GALNT15Q8N3T1 639 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 SCG3Q8WXD2 468 aaKnown RBP12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 ATG4AQ8WYN0 398 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 COX14Q96I36 57 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 FICDQ9BVA6 458 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 SPATA16Q9BXB7 569 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 GBA3Q9H227 469 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 SLC17A4Q9Y2C5 497 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 PPP2R2CQ9Y2T4 447 aa12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 PCYT1BQ9Y5K3 369 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC6B-205ENST00000555269 RGSL1A5PLK6 1076 aa12.33□□□□□ -0.44
TRAPPC6B-205ENST00000555269 GOLGA6L9A6NEM1 432 aa12.33□□□□□ -0.44
TRAPPC6B-205ENST00000555269 C5orf60A6NFR6 353 aa12.33□□□□□ -0.44
TRAPPC6B-205ENST00000555269 MT-CO3P00414 261 aa12.33□□□□□ -0.44
TRAPPC6B-205ENST00000555269 PROS1P07225 676 aa12.33□□□□□ -0.44
TRAPPC6B-205ENST00000555269 CDK4P11802 303 aa12.33□□□□□ -0.44
TRAPPC6B-205ENST00000555269 ADCY8P40145 1251 aa12.33□□□□□ -0.44
TRAPPC6B-205ENST00000555269 GDF10P55107 478 aa12.33□□□□□ -0.44
TRAPPC6B-205ENST00000555269 CTBSQ01459 385 aa12.33□□□□□ -0.44
TRAPPC6B-205ENST00000555269 OGFOD3Q6PK18 319 aa12.33□□□□□ -0.44
TRAPPC6B-205ENST00000555269 RANBP10Q6VN20 620 aa12.33□□□□□ -0.44
TRAPPC6B-205ENST00000555269 ZNF662Q6ZS27 426 aa12.33□□□□□ -0.44
TRAPPC6B-205ENST00000555269 TTC30BQ8N4P2 665 aa12.33□□□□□ -0.44
TRAPPC6B-205ENST00000555269 TAB3Q8N5C8 712 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC6B-205ENST00000555269 KYQ8NBH2 561 aa12.33□□□□□ -0.44
TRAPPC6B-205ENST00000555269 TTC13Q8NBP0 860 aa12.33□□□□□ -0.44
TRAPPC6B-205ENST00000555269 SLC35B2Q8TB61 432 aa12.33□□□□□ -0.44
TRAPPC6B-205ENST00000555269 BLOC1S5Q8TDH9 187 aa12.33□□□□□ -0.44
TRAPPC6B-205ENST00000555269 GPBAR1Q8TDU6 330 aa12.33□□□□□ -0.44
TRAPPC6B-205ENST00000555269 C1orf54Q8WWF1 131 aa12.33□□□□□ -0.44
TRAPPC6B-205ENST00000555269 SCARF2Q96GP6 870 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC6B-205ENST00000555269 SPATA13Q96N96 652 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms