RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 CCNA2P20248 432 aa17.49■□□□□ 0.39
SYNE3-202ENST00000553340 YAP1P46937 504 aaKnown RBP17.49■□□□□ 0.39
SYNE3-202ENST00000553340 ARSDP51689 593 aa17.49■□□□□ 0.39
SYNE3-202ENST00000553340 TGFBIQ15582 683 aa17.49■□□□□ 0.39
SYNE3-202ENST00000553340 AFMIDQ63HM1 303 aa17.49■□□□□ 0.39
SYNE3-202ENST00000553340 DCDC5Q6ZRR9 648 aa17.49■□□□□ 0.39
SYNE3-202ENST00000553340 CHST15Q7LFX5 561 aaPredicted RBP17.49■□□□□ 0.39
SYNE3-202ENST00000553340 ZNF467Q7Z7K2 595 aaPredicted RBP17.49■□□□□ 0.39
SYNE3-202ENST00000553340 RTL3Q8N8U3 475 aaKnown RBP17.49■□□□□ 0.39
SYNE3-202ENST00000553340 LEMD2Q8NC56 503 aa17.49■□□□□ 0.39
SYNE3-202ENST00000553340 SH3RF2Q8TEC5 729 aa17.49■□□□□ 0.39
SYNE3-202ENST00000553340 OSCP1Q8WVF1 389 aa17.49■□□□□ 0.39
SYNE3-202ENST00000553340 BTRCQ9Y297 605 aa17.49■□□□□ 0.39
SYNE3-202ENST00000553340 COQ6Q9Y2Z9 468 aa17.49■□□□□ 0.39
SYNE3-202ENST00000553340 OAS3Q9Y6K5 1087 aaKnown RBP17.49■□□□□ 0.39
SYNE3-202ENST00000553340 ZFC3H1O60293 1989 aaKnown RBP17.49■□□□□ 0.39
SYNE3-202ENST00000553340 MIA3Q5JRA6 1907 aa17.49■□□□□ 0.39
SYNE3-202ENST00000553340 LRRC14BA6NHZ5 514 aa17.49■□□□□ 0.39
SYNE3-202ENST00000553340 H0YAE9 185 aa17.49■□□□□ 0.39
SYNE3-202ENST00000553340 CPNE6O95741 557 aa17.49■□□□□ 0.39
SYNE3-202ENST00000553340 FDXRP22570 491 aa17.49■□□□□ 0.39
SYNE3-202ENST00000553340 CD86P42081 329 aa17.49■□□□□ 0.39
SYNE3-202ENST00000553340 TMBIM6P55061 237 aa17.49■□□□□ 0.39
SYNE3-202ENST00000553340 ADARB1P78563 741 aaKnown RBP17.49■□□□□ 0.39
SYNE3-202ENST00000553340 NFATC3Q12968 1075 aa17.49■□□□□ 0.39
SYNE3-202ENST00000553340 ACDQ96AP0 544 aa17.49■□□□□ 0.39
SYNE3-202ENST00000553340 NSUN5Q96P11 429 aaKnown RBP17.49■□□□□ 0.39
SYNE3-202ENST00000553340 PALMDQ9NP74 551 aa17.49■□□□□ 0.39
SYNE3-202ENST00000553340 NT5MQ9NPB1 228 aa17.49■□□□□ 0.39
SYNE3-202ENST00000553340 GPR45Q9Y5Y3 372 aa17.49■□□□□ 0.39
SYNE3-202ENST00000553340 NYNRINQ9P2P1 1898 aaKnown RBP17.49■□□□□ 0.39
SYNE3-202ENST00000553340 TYW5A2RUC4 315 aaKnown RBP17.48■□□□□ 0.39
SYNE3-202ENST00000553340 MROH6A6NGR9 719 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 OR51F1A6NGY5 319 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 ALBP02768 609 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 BDNFP23560 247 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 EEF1B2P24534 225 aaKnown RBP17.48■□□□□ 0.39
SYNE3-202ENST00000553340 RENBPP51606 427 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 PSMD7P51665 324 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 APLP1P51693 650 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 CLCNKBP51801 687 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 TRAF2Q12933 501 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 FUT11Q495W5 492 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 PDCD4Q53EL6 469 aaKnown RBP17.48■□□□□ 0.39
SYNE3-202ENST00000553340 BEND5Q7L4P6 421 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 SCML4Q8N228 414 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 OR13F1Q8NGS4 319 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 RPL10LQ96L21 214 aaKnown RBP17.48■□□□□ 0.39
SYNE3-202ENST00000553340 BDH2Q9BUT1 245 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 CCDC68Q9H2F9 335 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 ZFYVE28Q9HCC9 887 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 OSER1Q9NX31 292 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 MPP6Q9NZW5 540 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 ZNF639Q9UID6 485 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 H3BMM5 538 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 CRCPO75575 148 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 ZNF182P17025 639 aaPredicted RBP17.48■□□□□ 0.39
SYNE3-202ENST00000553340 BMXP51813 675 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 DIO3P55073 304 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 EEFSECP57772 596 aaKnown RBP17.48■□□□□ 0.39
SYNE3-202ENST00000553340 MAXP61244 160 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 ILF2Q12905 390 aaKnown RBP17.48■□□□□ 0.39
SYNE3-202ENST00000553340 OR4D1Q15615 310 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 GRAMD4Q6IC98 578 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 NANOGP8Q6NSW7 305 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 ZNF773Q6PK81 442 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 SPATA19Q7Z5L4 167 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 RHEBL1Q8TAI7 183 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 VPS33AQ96AX1 596 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 SLC30A3Q99726 388 aa17.48■□□□□ 0.39
SYNE3-202ENST00000553340 MTG1Q9BT17 334 aaPredicted RBP17.48■□□□□ 0.39
SYNE3-202ENST00000553340 FUOMA2VDF0 154 aa17.47■□□□□ 0.39
SYNE3-202ENST00000553340 BAIAP3O94812 1187 aa17.47■□□□□ 0.39
SYNE3-202ENST00000553340 ZBTB7AO95365 584 aa17.47■□□□□ 0.39
SYNE3-202ENST00000553340 F2P00734 622 aa17.47■□□□□ 0.39
SYNE3-202ENST00000553340 SLC2A3P11169 496 aa17.47■□□□□ 0.39
SYNE3-202ENST00000553340 MTHFD2P13995 350 aa17.47■□□□□ 0.39
SYNE3-202ENST00000553340 HOXB8P17481 243 aaPredicted RBP17.47■□□□□ 0.39
SYNE3-202ENST00000553340 RELAQ04206 551 aa17.47■□□□□ 0.39
SYNE3-202ENST00000553340 RCAN2Q14206 197 aa17.47■□□□□ 0.39
SYNE3-202ENST00000553340 OGFOD2Q6N063 350 aa17.47■□□□□ 0.39
SYNE3-202ENST00000553340 TANKQ92844 425 aa17.47■□□□□ 0.39
SYNE3-202ENST00000553340 SEPHS2Q99611 448 aa17.47■□□□□ 0.39
SYNE3-202ENST00000553340 GNPTGQ9UJJ9 305 aa17.47■□□□□ 0.39
SYNE3-202ENST00000553340 E9PAM4 449 aa17.47■□□□□ 0.39
SYNE3-202ENST00000553340 MSI1O43347 362 aaKnown RBP17.47■□□□□ 0.39
SYNE3-202ENST00000553340 MT-ND1P03886 318 aa17.47■□□□□ 0.39
SYNE3-202ENST00000553340 CYBBP04839 570 aa17.47■□□□□ 0.39
SYNE3-202ENST00000553340 SOX11P35716 441 aa17.47■□□□□ 0.39
SYNE3-202ENST00000553340 CRYBB1P53674 252 aaPredicted RBP17.47■□□□□ 0.39
SYNE3-202ENST00000553340 PHEXP78562 749 aa17.47■□□□□ 0.39
SYNE3-202ENST00000553340 GRIK2Q13002 908 aa17.47■□□□□ 0.39
SYNE3-202ENST00000553340 LCP2Q13094 533 aa17.47■□□□□ 0.39
SYNE3-202ENST00000553340 ZC3H7AQ8IWR0 971 aaKnown RBP17.47■□□□□ 0.39
SYNE3-202ENST00000553340 CENPSQ8N2Z9 138 aa17.47■□□□□ 0.39
SYNE3-202ENST00000553340 SFRP1Q8N474 314 aa17.47■□□□□ 0.39
SYNE3-202ENST00000553340 NRBF2Q96F24 287 aa17.47■□□□□ 0.39
SYNE3-202ENST00000553340 C1orf50Q9BV19 199 aa17.47■□□□□ 0.39
SYNE3-202ENST00000553340 ABCC13Q9NSE7 274 aa17.47■□□□□ 0.39
SYNE3-202ENST00000553340 SLC30A1Q9Y6M5 507 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms