RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 TTC13Q8NBP0 860 aa11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 GALNT6Q8NCL4 622 aa11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 SLC37A2Q8TED4 501 aa11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 TBC1D31Q96DN5 1066 aa11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 ZNF830Q96NB3 372 aaPredicted RBP11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 NCAPGQ9BPX3 1015 aa11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 TWSG1Q9GZX9 223 aa11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 SUDS3Q9H7L9 328 aaPredicted RBP11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 PDFQ9HBH1 243 aa11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 RCOR3Q9P2K3 495 aaPredicted RBP11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 KCND3Q9UK17 655 aa11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 PCNX1Q96RV3 2341 aa11.31□□□□□ -0.6
SUPT16H-202ENST00000552829 ZGRF1Q86YA3 2104 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 DCHS2Q6V1P9 2916 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 PIPSLA2A3N6 862 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 RASA4BC9J798 803 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 INPP4BO15327 924 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 RASA4O43374 803 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 EML2O95834 649 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 TPM3P06753 285 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 ANKRD34CP0C6C1 535 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 SLC9A1P19634 815 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 VARSP26640 1264 aaKnown RBP11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 EEF1GP26641 437 aaKnown RBP11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 ACTR1BP42025 376 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 RGRP47804 291 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 ACTR1AP61163 376 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 CDK3Q00526 305 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 DNASE1L3Q13609 305 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 JMJD6Q6NYC1 403 aaPredicted RBP11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 SRLQ86TD4 932 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 VSTM4Q8IW00 320 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 RTL3Q8N8U3 475 aaKnown RBP11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 PDCD6IPQ8WUM4 868 aaKnown RBP11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 NCSTNQ92542 709 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 AHCYL2Q96HN2 611 aaKnown RBP11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 NSMCE3Q96MG7 304 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 SLC38A3Q99624 504 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 CRACR2AQ9BSW2 395 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 SLC25A23Q9BV35 468 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 SLC29A3Q9BZD2 475 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 ULBP3Q9BZM4 244 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 APEX2Q9UBZ4 518 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 AJAP1Q9UKB5 411 aaPredicted RBP11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 SLC5A6Q9Y289 635 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 PCDHGB7Q9Y5F8 929 aa11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.3□□□□□ -0.6
SUPT16H-202ENST00000552829 SVILO95425 2214 aa11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 PKDREJQ9NTG1 2253 aa11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 WASH4PA8MWX3 477 aa11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 FOXN3O00409 490 aaPredicted RBP11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 TRAFD1O14545 582 aaPredicted RBP11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 KATNA1O75449 491 aa11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 CEACAM4O75871 244 aa11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 GNA14O95837 355 aa11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 NFKBIAP25963 317 aa11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 ATP11AP98196 1134 aa11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 LAMB3Q13751 1172 aa11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 NR1I3Q14994 352 aa11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 ACOX1Q15067 660 aa11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 PARP15Q460N3 678 aa11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 PYCR3Q53H96 274 aa11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 CFAP58Q5T655 872 aa11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 LCE2DQ5TA82 110 aaPredicted RBP11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 CPZQ66K79 652 aa11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 UMODL1-AS1Q8N2C9 162 aa11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 TMEM35BQ8NCS4 154 aa11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 CENPIQ92674 756 aaPredicted RBP11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 ZDHHC16Q969W1 377 aa11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 NUS1Q96E22 293 aa11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 MOCOSQ96EN8 888 aa11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 OR2M4Q96R27 311 aa11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 TUBGCP2Q9BSJ2 902 aa11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 ATP13A3Q9H7F0 1226 aa11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 SARS2Q9NP81 518 aaKnown RBP11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 KCTD5Q9NXV2 234 aa11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 MN1Q10571 1320 aaPredicted RBP11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 CSMD2Q7Z408 3487 aa11.29□□□□□ -0.6
SUPT16H-202ENST00000552829 TRBV23OR9-2A0A075B6M9 112 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 LGALS16A8MUM7 142 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 GOLGA8SH3BPF8 625 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 HNRNPRO43390 633 aaKnown RBP11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 KIAA0754O94854 1291 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 C9P02748 559 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 TPM2P07951 284 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 SERPINA4P29622 427 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 NOP2P46087 812 aaKnown RBP11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 LEPRP48357 1165 aaKnown RBP11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 EPHA4P54764 986 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 UBXN1Q04323 297 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 IL11RAQ14626 422 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 CNGA3Q16281 694 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 UGT8Q16880 541 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 C15orf59Q2T9L4 293 aaPredicted RBP11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 CCDC14Q49A88 953 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 C2CD6Q53TS8 623 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 FAM71AQ8IYT1 594 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 CCDC185Q8N715 623 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 EMC1Q8N766 993 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms