RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 A6NCN8 305 aa16.02■□□□□ 0.16
CALCOCO1-220ENST00000552282 MATN3O15232 486 aa16.02■□□□□ 0.16
CALCOCO1-220ENST00000552282 MFSD11O43934 449 aa16.02■□□□□ 0.16
CALCOCO1-220ENST00000552282 ALDH4A1P30038 563 aa16.02■□□□□ 0.16
CALCOCO1-220ENST00000552282 ACTR1BP42025 376 aa16.02■□□□□ 0.16
CALCOCO1-220ENST00000552282 POLD2P49005 469 aa16.02■□□□□ 0.16
CALCOCO1-220ENST00000552282 ACTR1AP61163 376 aa16.02■□□□□ 0.16
CALCOCO1-220ENST00000552282 IQCB1Q15051 598 aa16.02■□□□□ 0.16
CALCOCO1-220ENST00000552282 TBR1Q16650 682 aa16.02■□□□□ 0.16
CALCOCO1-220ENST00000552282 NCBP2-AS2Q69YL0 99 aa16.02■□□□□ 0.16
CALCOCO1-220ENST00000552282 VASH2Q86V25 355 aa16.02■□□□□ 0.16
CALCOCO1-220ENST00000552282 EXD1Q8NHP7 514 aa16.02■□□□□ 0.16
CALCOCO1-220ENST00000552282 NAP1L5Q96NT1 182 aaPredicted RBP16.02■□□□□ 0.16
CALCOCO1-220ENST00000552282 TEFMQ96QE5 360 aaKnown RBP16.02■□□□□ 0.16
CALCOCO1-220ENST00000552282 ASPSCR1Q9BZE9 553 aa16.02■□□□□ 0.16
CALCOCO1-220ENST00000552282 THAP2Q9H0W7 228 aa16.02■□□□□ 0.16
CALCOCO1-220ENST00000552282 NT5MQ9NPB1 228 aa16.02■□□□□ 0.16
CALCOCO1-220ENST00000552282 HAUS2Q9NVX0 235 aa16.02■□□□□ 0.16
CALCOCO1-220ENST00000552282 GEMIN8Q9NWZ8 242 aaKnown RBP16.02■□□□□ 0.16
CALCOCO1-220ENST00000552282 MYO1AQ9UBC5 1043 aa16.02■□□□□ 0.16
CALCOCO1-220ENST00000552282 TUBD1Q9UJT1 453 aa16.02■□□□□ 0.16
CALCOCO1-220ENST00000552282 ANAPC7Q9UJX3 599 aa16.02■□□□□ 0.16
CALCOCO1-220ENST00000552282 NENFQ9UMX5 172 aa16.02■□□□□ 0.16
CALCOCO1-220ENST00000552282 SPENQ96T58 3664 aaKnown RBP16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 RGSL1A5PLK6 1076 aa16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 SUV39H1O43463 412 aa16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 DNAJC6O75061 913 aa16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 PRLP01236 227 aa16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 CA4P22748 312 aa16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 CCNCP24863 283 aa16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 ANP32AP39687 249 aaKnown RBP16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 ATP1A2P50993 1020 aa16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 EPHA4P54764 986 aa16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 KCNC4Q03721 635 aa16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 NFATC3Q12968 1075 aa16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 AMZ1Q400G9 498 aa16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 HENMT1Q5T8I9 393 aaKnown RBP16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 WDR74Q6RFH5 385 aaPredicted RBP16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 ARHGAP22Q7Z5H3 698 aa16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 RCBTB1Q8NDN9 531 aa16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 ARRDC2Q8TBH0 407 aa16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 SLC37A2Q8TED4 501 aa16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 SCAMP4Q969E2 229 aa16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 WDR24Q96S15 920 aa16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 EPB41L1Q9H4G0 881 aa16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 RMI1Q9H9A7 625 aa16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 SARS2Q9NP81 518 aaKnown RBP16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 NFKBIL1Q9UBC1 381 aaPredicted RBP16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 NAV2Q8IVL1 2488 aa16.01■□□□□ 0.15
CALCOCO1-220ENST00000552282 COL12A1Q99715 3063 aa16■□□□□ 0.15
CALCOCO1-220ENST00000552282 CAPN5O15484 640 aaPredicted RBP16■□□□□ 0.15
CALCOCO1-220ENST00000552282 SKILP12757 684 aa16■□□□□ 0.15
CALCOCO1-220ENST00000552282 CSTF2P33240 577 aaKnown RBP eCLIP16■□□□□ 0.15
CALCOCO1-220ENST00000552282 UGT1A3P35503 534 aa16■□□□□ 0.15
CALCOCO1-220ENST00000552282 ZNF165P49910 485 aa16■□□□□ 0.15
CALCOCO1-220ENST00000552282 CLCNKAP51800 687 aa16■□□□□ 0.15
CALCOCO1-220ENST00000552282 DPYSL3Q14195 570 aa16■□□□□ 0.15
CALCOCO1-220ENST00000552282 PTPRRQ15256 657 aa16■□□□□ 0.15
CALCOCO1-220ENST00000552282 IFI16Q16666 785 aaKnown RBP16■□□□□ 0.15
CALCOCO1-220ENST00000552282 DENND2CQ68D51 928 aa16■□□□□ 0.15
CALCOCO1-220ENST00000552282 RFLNAQ6ZTI6 216 aa16■□□□□ 0.15
CALCOCO1-220ENST00000552282 GALNT13Q8IUC8 556 aa16■□□□□ 0.15
CALCOCO1-220ENST00000552282 PMEPA1Q969W9 287 aa16■□□□□ 0.15
CALCOCO1-220ENST00000552282 HDAC11Q96DB2 347 aa16■□□□□ 0.15
CALCOCO1-220ENST00000552282 ARHGAP9Q9BRR9 750 aa16■□□□□ 0.15
CALCOCO1-220ENST00000552282 FAM117AQ9C073 453 aa16■□□□□ 0.15
CALCOCO1-220ENST00000552282 KCNK4Q9NYG8 393 aa16■□□□□ 0.15
CALCOCO1-220ENST00000552282 LCMT1Q9UIC8 334 aa16■□□□□ 0.15
CALCOCO1-220ENST00000552282 CNOT6Q9ULM6 557 aaKnown RBP16■□□□□ 0.15
CALCOCO1-220ENST00000552282 HEMK1Q9Y5R4 338 aaPredicted RBP16■□□□□ 0.15
CALCOCO1-220ENST00000552282 B3GALT1Q9Y5Z6 326 aa16■□□□□ 0.15
CALCOCO1-220ENST00000552282 ZNF487B1APH4 448 aa15.99■□□□□ 0.15
CALCOCO1-220ENST00000552282 DUX1O43812 170 aa15.99■□□□□ 0.15
CALCOCO1-220ENST00000552282 PPFIA2O75334 1257 aa15.99■□□□□ 0.15
CALCOCO1-220ENST00000552282 SERPING1P05155 500 aa15.99■□□□□ 0.15
CALCOCO1-220ENST00000552282 CD48P09326 243 aa15.99■□□□□ 0.15
CALCOCO1-220ENST00000552282 FAM87AP0C7U9 286 aa15.99■□□□□ 0.15
CALCOCO1-220ENST00000552282 CTPS1P17812 591 aa15.99■□□□□ 0.15
CALCOCO1-220ENST00000552282 PDK2Q15119 407 aa15.99■□□□□ 0.15
CALCOCO1-220ENST00000552282 HADHQ16836 314 aaKnown RBP15.99■□□□□ 0.15
CALCOCO1-220ENST00000552282 CRTC2Q53ET0 693 aaPredicted RBP15.99■□□□□ 0.15
CALCOCO1-220ENST00000552282 TDRD12Q587J7 1177 aaKnown RBP15.99■□□□□ 0.15
CALCOCO1-220ENST00000552282 ATG14Q6ZNE5 492 aa15.99■□□□□ 0.15
CALCOCO1-220ENST00000552282 AVL9Q8NBF6 648 aa15.99■□□□□ 0.15
CALCOCO1-220ENST00000552282 ART4Q93070 314 aa15.99■□□□□ 0.15
CALCOCO1-220ENST00000552282 COL26A1Q96A83 441 aa15.99■□□□□ 0.15
CALCOCO1-220ENST00000552282 SLC45A3Q96JT2 553 aa15.99■□□□□ 0.15
CALCOCO1-220ENST00000552282 CATSPER2Q96P56 530 aa15.99■□□□□ 0.15
CALCOCO1-220ENST00000552282 AGAP2Q99490 1192 aa15.99■□□□□ 0.15
CALCOCO1-220ENST00000552282 ZPBPQ9BS86 351 aa15.99■□□□□ 0.15
CALCOCO1-220ENST00000552282 HERPUD2Q9BSE4 406 aa15.99■□□□□ 0.15
CALCOCO1-220ENST00000552282 NUP85Q9BW27 656 aa15.99■□□□□ 0.15
CALCOCO1-220ENST00000552282 SLC25A18Q9H1K4 315 aa15.99■□□□□ 0.15
CALCOCO1-220ENST00000552282 PILRAQ9UKJ1 303 aa15.99■□□□□ 0.15
CALCOCO1-220ENST00000552282 PLEKHM1Q9Y4G2 1056 aa15.99■□□□□ 0.15
CALCOCO1-220ENST00000552282 MN1Q10571 1320 aaPredicted RBP15.98■□□□□ 0.15
CALCOCO1-220ENST00000552282 A0A087X0T9 212 aa15.98■□□□□ 0.15
CALCOCO1-220ENST00000552282 KIR2DS5A0A0G2JLQ3 304 aa15.98■□□□□ 0.15
CALCOCO1-220ENST00000552282 A0A0G2JNG1 304 aa15.98■□□□□ 0.15
CALCOCO1-220ENST00000552282 LILRA5A6NI73 299 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms