RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 METTL21CQ5VZV1 264 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 PAQR3Q6TCH7 311 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 FRMD7Q6ZUT3 714 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 TMEM25Q86YD3 366 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 PHTF2Q8N3S3 785 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 POU5F2Q8N7G0 328 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 OR2AP1Q8NGE2 309 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 GIMAP7Q8NHV1 300 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 RHEBL1Q8TAI7 183 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 EXT2Q93063 718 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 FAM136AQ96C01 138 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 MAELQ96JY0 434 aaKnown RBP11.46□□□□□ -0.57
RAB5C-208ENST00000551338 GPR21Q99679 349 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 SLC30A3Q99726 388 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 NUF2Q9BZD4 464 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 DERL2Q9GZP9 239 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 P2RY12Q9H244 342 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 CCDC68Q9H2F9 335 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 DENND2DQ9H6A0 471 aaPredicted RBP11.46□□□□□ -0.57
RAB5C-208ENST00000551338 WDR55Q9H6Y2 383 aaPredicted RBP11.46□□□□□ -0.57
RAB5C-208ENST00000551338 SYTL2Q9HCH5 934 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.46□□□□□ -0.57
RAB5C-208ENST00000551338 GTSE1Q9NYZ3 720 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 GALPQ9UBC7 116 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 FAM50BQ9Y247 325 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 VPS9D1Q9Y2B5 631 aa11.46□□□□□ -0.57
RAB5C-208ENST00000551338 DENND4AQ7Z401 1863 aa11.46□□□□□ -0.58
RAB5C-208ENST00000551338 TCF20Q9UGU0 1960 aaKnown RBP11.45□□□□□ -0.58
RAB5C-208ENST00000551338 SOBPA7XYQ1 873 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 UBXN8O00124 270 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 OR1I1O60431 355 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 MAGEC1O60732 1142 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 SMIM24O75264 130 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 VPS26AO75436 327 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 HNRNPA1P09651 372 aaKnown RBP eCLIP11.45□□□□□ -0.58
RAB5C-208ENST00000551338 PABPC1P11940 636 aaKnown RBP11.45□□□□□ -0.58
RAB5C-208ENST00000551338 TCF3P15923 654 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 SYN1P17600 705 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 NCF2P19878 526 aaPredicted RBP11.45□□□□□ -0.58
RAB5C-208ENST00000551338 IMPDH1P20839 514 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 EPHA3P29320 983 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 HMGCLP35914 325 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 CPOXP36551 454 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 SATB1Q01826 763 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 CACNG1Q06432 222 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 GALNT1Q10472 559 aaPredicted RBP11.45□□□□□ -0.58
RAB5C-208ENST00000551338 DNAL1Q4LDG9 190 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 AARS2Q5JTZ9 985 aaKnown RBP11.45□□□□□ -0.58
RAB5C-208ENST00000551338 FAM219BQ5XKK7 198 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 ACAD11Q709F0 780 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 CUZD1Q86UP6 607 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 TMPRSS6Q8IU80 811 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 RYBPQ8N488 228 aaPredicted RBP11.45□□□□□ -0.58
RAB5C-208ENST00000551338 PTGR2Q8N8N7 351 aaPredicted RBP11.45□□□□□ -0.58
RAB5C-208ENST00000551338 LEMD2Q8NC56 503 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 GRIN3AQ8TCU5 1115 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 CD200R1Q8TD46 325 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 KIAA1191Q96A73 305 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 MCUR1Q96AQ8 359 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 ISG20Q96AZ6 181 aaKnown RBP11.45□□□□□ -0.58
RAB5C-208ENST00000551338 PHF21BQ96EK2 531 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 CCDC97Q96F63 343 aaPredicted RBP11.45□□□□□ -0.58
RAB5C-208ENST00000551338 RPL10LQ96L21 214 aaKnown RBP11.45□□□□□ -0.58
RAB5C-208ENST00000551338 PPP1R36Q96LQ0 422 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 C19orf43Q9BQ61 176 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 MMADHCQ9H3L0 296 aaPredicted RBP11.45□□□□□ -0.58
RAB5C-208ENST00000551338 ATP13A3Q9H7F0 1226 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 TAS2R13Q9NYV9 303 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 CDYLQ9Y232 598 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 HS3ST2Q9Y278 367 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 FNDC3AQ9Y2H6 1198 aaKnown RBP11.45□□□□□ -0.58
RAB5C-208ENST00000551338 PKP3Q9Y446 797 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 SLC30A1Q9Y6M5 507 aa11.45□□□□□ -0.58
RAB5C-208ENST00000551338 TRBV5-4A0A0C4DH59 114 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 C1orf232A0A0U1RR37 186 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 NPEPPSL1A6NEC2 478 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 LRRC14BA6NHZ5 514 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 NEDD8-MDP1E9PL57 170 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 UBFD1O14562 309 aaKnown RBP11.44□□□□□ -0.58
RAB5C-208ENST00000551338 DCXO43602 365 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 KERAO60938 352 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 ECI2O75521 394 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 SKAP2O75563 359 aaPredicted RBP11.44□□□□□ -0.58
RAB5C-208ENST00000551338 CLDN7O95471 211 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 TSPAN12O95859 305 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 PYGLP06737 847 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 TPBGLP0DKB5 382 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 COX4I1P13073 169 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 MYOGP15173 224 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 CEBPBP17676 345 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 RPS3P23396 243 aaKnown RBP eCLIP11.44□□□□□ -0.581e-8■□□□□ 11.1
RAB5C-208ENST00000551338 PIK3R1P27986 724 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 SERPINA4P29622 427 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 HNF1BP35680 557 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 PGM1P36871 562 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 RAP1GDS1P52306 607 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 INHBCP55103 352 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 ADARP55265 1226 aaKnown RBP11.44□□□□□ -0.58
RAB5C-208ENST00000551338 ATP6V0D1P61421 351 aa11.44□□□□□ -0.58
RAB5C-208ENST00000551338 SNRPD1P62314 119 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms