RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 SNHG28P0DPA3 235 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 AOC1P19801 751 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 CA4P22748 312 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 CYP3A7P24462 503 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 TKTP29401 623 aaKnown RBP3.35□□□□□ -1.87
CCNT1-203ENST00000550457 GTF2H1P32780 548 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 IGHMBP2P38935 993 aaKnown RBP3.35□□□□□ -1.87
CCNT1-203ENST00000550457 MLH1P40692 756 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 CDK9P50750 372 aaKnown RBP3.35□□□□□ -1.87
CCNT1-203ENST00000550457 NEK2P51955 445 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 ITGA8P53708 1063 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 SNRPFP62306 86 aaKnown RBP3.35□□□□□ -1.87
CCNT1-203ENST00000550457 ENPEPQ07075 957 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 PPIDQ08752 370 aaKnown RBP3.35□□□□□ -1.87
CCNT1-203ENST00000550457 ALCAMQ13740 583 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 BTG3Q14201 252 aaPredicted RBP3.35□□□□□ -1.87
CCNT1-203ENST00000550457 CTTNQ14247 550 aaKnown RBP3.35□□□□□ -1.87
CCNT1-203ENST00000550457 KRT81Q14533 505 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 LPIN1Q14693 890 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 DRAP1Q14919 205 aaPredicted RBP3.35□□□□□ -1.87
CCNT1-203ENST00000550457 ODF1Q14990 250 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 LRRC41Q15345 812 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 SIX1Q15475 284 aaPredicted RBP3.35□□□□□ -1.87
CCNT1-203ENST00000550457 TRIP6Q15654 476 aaKnown RBP3.35□□□□□ -1.87
CCNT1-203ENST00000550457 EFHC1Q5JVL4 640 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 TMEM63BQ5T3F8 832 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 LGSNQ5TDP6 509 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 PXDC1Q5TGL8 231 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 WDR78Q5VTH9 848 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 C1orf146Q5VVC0 180 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 ATG16L1Q676U5 607 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 ZFP1Q6P2D0 407 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 TTC27Q6P3X3 843 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 MOXD1Q6UVY6 613 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 UGT2A3Q6UWM9 527 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 TRIM72Q6ZMU5 477 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 FAM47EQ6ZV65 393 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 FRA10AC1Q70Z53 315 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 MAEAQ7L5Y9 396 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 ZDHHC17Q8IUH5 632 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 LRRC71Q8N4P6 559 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 ATP11CQ8NB49 1132 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 LSM14AQ8ND56 463 aaKnown RBP3.35□□□□□ -1.87
CCNT1-203ENST00000550457 FAM46DQ8NEK8 389 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 LNX1Q8TBB1 728 aaPredicted RBP3.35□□□□□ -1.87
CCNT1-203ENST00000550457 TBCKQ8TEA7 893 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 LRRC15Q8TF66 581 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 PYROXD1Q8WU10 500 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 ATG4AQ8WYN0 398 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 OXNAD1Q96HP4 312 aaPredicted RBP3.35□□□□□ -1.87
CCNT1-203ENST00000550457 SNX27Q96L92 541 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 C7orf26Q96N11 449 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 ZMAT2Q96NC0 199 aaKnown RBP3.35□□□□□ -1.87
CCNT1-203ENST00000550457 SLC46A1Q96NT5 459 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 PLIN2Q99541 437 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 TSSK1BQ9BXA7 367 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 UNKQ9C0B0 810 aaKnown RBP3.35□□□□□ -1.87
CCNT1-203ENST00000550457 SIK2Q9H0K1 926 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 MRPL46Q9H2W6 279 aaKnown RBP3.35□□□□□ -1.87
CCNT1-203ENST00000550457 EBF3Q9H4W6 596 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 DNAJC18Q9H819 358 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 S100A14Q9HCY8 104 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 ERVK-5Q9HDB9 667 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 SIX2Q9NPC8 291 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 OLFML3Q9NRN5 406 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 VPS45Q9NRW7 570 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 TBC1D23Q9NUY8 699 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 ETNK2Q9NVF9 386 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 ARL8BQ9NVJ2 186 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 KCND2Q9NZV8 630 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 HEY2Q9UBP5 337 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 HESX1Q9UBX0 185 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 ABCF2Q9UG63 623 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 MAD2L2Q9UI95 211 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 HERC5Q9UII4 1024 aaKnown RBP3.35□□□□□ -1.87
CCNT1-203ENST00000550457 FAF1Q9UNN5 650 aaPredicted RBP3.35□□□□□ -1.87
CCNT1-203ENST00000550457 SHOC2Q9UQ13 582 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 DRG1Q9Y295 367 aaKnown RBP3.35□□□□□ -1.87
CCNT1-203ENST00000550457 MAD1L1Q9Y6D9 718 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 KAT6BQ8WYB5 2073 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 SPATA31A1Q5TZJ5 1347 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 LTN1O94822 1766 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 TNS2Q63HR2 1409 aa3.35□□□□□ -1.87
CCNT1-203ENST00000550457 AKAP11Q9UKA4 1901 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 DUOX1Q9NRD9 1551 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 C5P01031 1676 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 PLCH1Q4KWH8 1693 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 NUP188Q5SRE5 1749 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 SCN11AQ9UI33 1791 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 C15orf38-AP3S2A0A0A6YYH1 394 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 A0A0G2JND7 137 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 IQANK1A0A1B0GTG1 560 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 EIF4E1BA6NMX2 242 aaKnown RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 KLRF2D3W0D1 207 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 FCHO1O14526 889 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 LSM1O15116 133 aaKnown RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 SLC22A2O15244 555 aa3.34□□□□□ -1.87
CCNT1-203ENST00000550457 BUD23O43709 281 aaKnown RBP3.34□□□□□ -1.87
CCNT1-203ENST00000550457 CYTH3O43739 400 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms