RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 HTRA2O43464 458 aaPredicted RBP17.37■□□□□ 0.37
HDAC7-227ENST00000548080 AP1G1O43747 822 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 ZNF806P0C7X5 589 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 CTPS1P17812 591 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 CD27P26842 260 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 CSNK1EP49674 416 aaKnown RBP17.37■□□□□ 0.37
HDAC7-227ENST00000548080 FGL2Q14314 439 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 FRG1Q14331 258 aaKnown RBP17.37■□□□□ 0.37
HDAC7-227ENST00000548080 CSRP2Q16527 193 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 KBTBD12Q3ZCT8 623 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 BRAT1Q6PJG6 821 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 CES3Q6UWW8 571 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 PRR23CQ6ZRP0 262 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 RIBC1Q8N443 379 aaPredicted RBP17.37■□□□□ 0.37
HDAC7-227ENST00000548080 OR2I1PQ8NGU4 316 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 ZNF669Q96BR6 464 aaPredicted RBP17.37■□□□□ 0.37
HDAC7-227ENST00000548080 ECHDC3Q96DC8 303 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 SERAC1Q96JX3 654 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 FCRL3Q96P31 734 aaPredicted RBP17.37■□□□□ 0.37
HDAC7-227ENST00000548080 RANBP9Q96S59 729 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 AASDHPPTQ9NRN7 309 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 VPS18Q9P253 973 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 TCAF1Q9Y4C2 921 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 FAM169AQ9Y6X4 670 aa17.37■□□□□ 0.37
HDAC7-227ENST00000548080 KNL1Q8NG31 2342 aa17.36■□□□□ 0.37
HDAC7-227ENST00000548080 HEATR9A2RTY3 570 aa17.36■□□□□ 0.37
HDAC7-227ENST00000548080 HMGB1P1B2RPK0 211 aaPredicted RBP17.36■□□□□ 0.37
HDAC7-227ENST00000548080 KHNYNO15037 678 aaKnown RBP17.36■□□□□ 0.37
HDAC7-227ENST00000548080 BCAT2O15382 392 aaPredicted RBP17.36■□□□□ 0.37
HDAC7-227ENST00000548080 LATO43561 262 aa17.36■□□□□ 0.37
HDAC7-227ENST00000548080 CDH16O75309 829 aa17.36■□□□□ 0.37
HDAC7-227ENST00000548080 PRLP01236 227 aa17.36■□□□□ 0.37
HDAC7-227ENST00000548080 C1QAP02745 245 aa17.36■□□□□ 0.37
HDAC7-227ENST00000548080 GCAP28676 217 aa17.36■□□□□ 0.37
HDAC7-227ENST00000548080 MSH2P43246 934 aa17.36■□□□□ 0.37
HDAC7-227ENST00000548080 MSLNQ13421 630 aaPredicted RBP17.36■□□□□ 0.37
HDAC7-227ENST00000548080 GALNT3Q14435 633 aa17.36■□□□□ 0.37
HDAC7-227ENST00000548080 EFTUD2Q15029 972 aaKnown RBP eCLIP17.36■□□□□ 0.371e-6■■■■□ 23
HDAC7-227ENST00000548080 RASA2Q15283 850 aa17.36■□□□□ 0.37
HDAC7-227ENST00000548080 DUOXA1Q1HG43 343 aa17.36■□□□□ 0.37
HDAC7-227ENST00000548080 TMEM259Q4ZIN3 620 aa17.36■□□□□ 0.37
HDAC7-227ENST00000548080 TRMT10BQ6PF06 316 aaKnown RBP17.36■□□□□ 0.37
HDAC7-227ENST00000548080 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.36■□□□□ 0.37
HDAC7-227ENST00000548080 RAB7BQ96AH8 199 aa17.36■□□□□ 0.37
HDAC7-227ENST00000548080 DHRS4Q9BTZ2 278 aa17.36■□□□□ 0.37
HDAC7-227ENST00000548080 ADGRE3Q9BY15 652 aa17.36■□□□□ 0.37
HDAC7-227ENST00000548080 STMN4Q9H169 189 aaPredicted RBP17.36■□□□□ 0.37
HDAC7-227ENST00000548080 LGALS13Q9UHV8 139 aa17.36■□□□□ 0.37
HDAC7-227ENST00000548080 CACNA1EQ15878 2313 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 PCDH15Q96QU1 1955 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 A0A1B0GTW7 788 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 ZCWPW2A0A1B0GU75 182 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 A0A1B0GVT2 93 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 LNP1A1A4G5 178 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 FAM159BA6NKW6 160 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 H0Y8X5 98 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 TSPAN6O43657 245 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 SOCS5O75159 536 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 PGLSO95336 258 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 WNT1P04628 370 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 ALPIP09923 528 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 GNSP15586 552 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 NMBRP28336 390 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 MMP12P39900 470 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 CLDN2P57739 230 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 BNC1Q01954 994 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 LAMB3Q13751 1172 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 SEPT6Q14141 434 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 AASDHQ4L235 1098 aaPredicted RBP17.35■□□□□ 0.37
HDAC7-227ENST00000548080 ARMC12Q5T9G4 340 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 KCTD16Q68DU8 428 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 ZNF449Q6P9G9 518 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 LPCAT1Q8NF37 534 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 CXorf40AQ8TE69 158 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 RMDN1Q96DB5 314 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 MRRFQ96E11 262 aaKnown RBP17.35■□□□□ 0.37
HDAC7-227ENST00000548080 MFSD3Q96ES6 412 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 PAFAH2Q99487 392 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 B4GALT6Q9UBX8 382 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 TMEM131Q92545 1883 aa17.35■□□□□ 0.37
HDAC7-227ENST00000548080 CFAP54Q96N23 3096 aa17.34■□□□□ 0.37
HDAC7-227ENST00000548080 RAD51BO15315 384 aa17.34■□□□□ 0.37
HDAC7-227ENST00000548080 LRP3O75074 770 aa17.34■□□□□ 0.37
HDAC7-227ENST00000548080 PAK4O96013 591 aaPredicted RBP17.34■□□□□ 0.37
HDAC7-227ENST00000548080 RPS21P63220 83 aaKnown RBP17.34■□□□□ 0.37
HDAC7-227ENST00000548080 MGAT5Q09328 741 aa17.34■□□□□ 0.37
HDAC7-227ENST00000548080 SKIDA1Q1XH10 827 aa17.34■□□□□ 0.37
HDAC7-227ENST00000548080 SETMARQ53H47 684 aaPredicted RBP17.34■□□□□ 0.37
HDAC7-227ENST00000548080 KIAA1161Q6NSJ0 714 aa17.34■□□□□ 0.37
HDAC7-227ENST00000548080 ERAP2Q6P179 960 aa17.34■□□□□ 0.37
HDAC7-227ENST00000548080 NLRP9Q7RTR0 991 aa17.34■□□□□ 0.37
HDAC7-227ENST00000548080 LRRC6Q86X45 466 aa17.34■□□□□ 0.37
HDAC7-227ENST00000548080 CTAGE3PQ8IX95 158 aa17.34■□□□□ 0.37
HDAC7-227ENST00000548080 PPM1NQ8N819 430 aa17.34■□□□□ 0.37
HDAC7-227ENST00000548080 HCAR2Q8TDS4 363 aa17.34■□□□□ 0.37
HDAC7-227ENST00000548080 PIH1D2Q8WWB5 315 aa17.34■□□□□ 0.37
HDAC7-227ENST00000548080 SLC44A1Q8WWI5 657 aa17.34■□□□□ 0.37
HDAC7-227ENST00000548080 TLCD1Q96CP7 247 aa17.34■□□□□ 0.37
HDAC7-227ENST00000548080 GTPBP2Q9BX10 602 aaKnown RBP17.34■□□□□ 0.37
HDAC7-227ENST00000548080 NUSAP1Q9BXS6 441 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms