RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 PYGLP06737 847 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 SLC35E2BP0CK96 405 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 CHRM1P11229 460 aaPredicted RBP12.32□□□□□ -0.44
RAB5B-204ENST00000548068 NEFHP12036 1026 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 FOSL2P15408 326 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 ZNF7P17097 686 aaPredicted RBP12.32□□□□□ -0.44
RAB5B-204ENST00000548068 BPIP17213 487 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 DRD1P21728 446 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 CD9P21926 228 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 LHCGRP22888 699 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 MMP12P39900 470 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 ETV4P43268 484 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 SOX9P48436 509 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 SERPINB4P48594 390 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 TAS2R39P59534 338 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 PPARDQ03181 441 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 GRSF1Q12849 480 aaKnown RBP eCLIP12.32□□□□□ -0.44
RAB5B-204ENST00000548068 NFATC2Q13469 925 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 SEMA3AQ14563 771 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 STARD3Q14849 445 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 PTPRRQ15256 657 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 SMAD2Q15796 467 aaKnown RBP12.32□□□□□ -0.44
RAB5B-204ENST00000548068 CCDC85BQ15834 202 aaPredicted RBP12.32□□□□□ -0.44
RAB5B-204ENST00000548068 FAM83EQ2M2I3 478 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 RBM20Q5T481 1227 aaKnown RBP12.32□□□□□ -0.44
RAB5B-204ENST00000548068 N4BP2L1Q5TBK1 243 aaPredicted RBP12.32□□□□□ -0.44
RAB5B-204ENST00000548068 PSAPL1Q6NUJ1 521 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 KLC3Q6P597 504 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 FBXL19Q6PCT2 694 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 FAM151BQ6UXP7 276 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 CHPFQ8IZ52 775 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 RBFAQ8N0V3 343 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 CCDC63Q8NA47 563 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 RDH11Q8TC12 318 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 RAB7BQ96AH8 199 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 EID2BQ96D98 161 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 AARSD1Q9BTE6 412 aaKnown RBP12.32□□□□□ -0.44
RAB5B-204ENST00000548068 ASB8Q9H765 288 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 KCNK12Q9HB15 430 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 IL26Q9NPH9 171 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 PRSS16Q9NQE7 514 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 CACNA2D2Q9NY47 1150 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 TAS2R13Q9NYV9 303 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 CRLS1Q9UJA2 301 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 PIAS3Q9Y6X2 628 aa12.32□□□□□ -0.44
RAB5B-204ENST00000548068 F8W8V4 182 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 PHGDHO43175 533 aaKnown RBP12.31□□□□□ -0.44
RAB5B-204ENST00000548068 VPS26AO75436 327 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 KLHL2O95198 593 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 FAM107AO95990 144 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 VIMP08670 466 aaKnown RBP12.31□□□□□ -0.44
RAB5B-204ENST00000548068 F7P08709 466 aaPredicted RBP12.31□□□□□ -0.44
RAB5B-204ENST00000548068 C1SP09871 688 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 ELFN1P0C7U0 828 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 FDXRP22570 491 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 RPS3P23396 243 aaKnown RBP eCLIP12.31□□□□□ -0.44
RAB5B-204ENST00000548068 NTSR1P30989 418 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 SPINT3P49223 89 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 PTSQ03393 145 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 PDAP1Q13442 181 aaKnown RBP12.31□□□□□ -0.44
RAB5B-204ENST00000548068 CAMK2GQ13555 558 aaPredicted RBP12.31□□□□□ -0.44
RAB5B-204ENST00000548068 ITIH4Q14624 930 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 LEXMQ3ZCV2 418 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 ZNF789Q5FWF6 425 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 PPM1JQ5JR12 505 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 AGAP9Q5VTM2 703 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 ATG16L1Q676U5 607 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 UGT3A1Q6NUS8 523 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 CDHR3Q6ZTQ4 885 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 ERN2Q76MJ5 926 aaKnown RBP12.31□□□□□ -0.44
RAB5B-204ENST00000548068 CPLX4Q7Z7G2 160 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 LDB1Q86U70 411 aaPredicted RBP12.31□□□□□ -0.44
RAB5B-204ENST00000548068 SFTPA1Q8IWL2 248 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 PIANPQ8IYJ0 282 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 NRSN1Q8IZ57 195 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 SLC44A3Q8N4M1 653 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 ARMC2Q8NEN0 867 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 ZNF398Q8TD17 642 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 BCAS4Q8TDM0 211 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 FAM129BQ96TA1 746 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 NDNQ99608 321 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 CDX2Q99626 313 aaPredicted RBP12.31□□□□□ -0.44
RAB5B-204ENST00000548068 HDAC8Q9BY41 377 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 CLPBQ9H078 707 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 GPAMQ9HCL2 828 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 LIMD1Q9UGP4 676 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 GNPTGQ9UJJ9 305 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 CRYL1Q9Y2S2 319 aa12.31□□□□□ -0.44
RAB5B-204ENST00000548068 REV3LO60673 3130 aa12.3□□□□□ -0.44
RAB5B-204ENST00000548068 A8MX80 341 aa12.3□□□□□ -0.44
RAB5B-204ENST00000548068 TCP11X1B4DZS4 312 aa12.3□□□□□ -0.44
RAB5B-204ENST00000548068 K7EQS6 105 aa12.3□□□□□ -0.44
RAB5B-204ENST00000548068 GAPDHSO14556 408 aaPredicted RBP12.3□□□□□ -0.44
RAB5B-204ENST00000548068 NDUFAB1O14561 156 aa12.3□□□□□ -0.44
RAB5B-204ENST00000548068 PRMT5O14744 637 aaPredicted RBP12.3□□□□□ -0.44
RAB5B-204ENST00000548068 KLF11O14901 512 aa12.3□□□□□ -0.44
RAB5B-204ENST00000548068 H2AFYO75367 372 aaKnown RBP12.3□□□□□ -0.44
RAB5B-204ENST00000548068 RHOBTB1O94844 696 aa12.3□□□□□ -0.44
RAB5B-204ENST00000548068 PROCP04070 461 aa12.3□□□□□ -0.44
RAB5B-204ENST00000548068 LTA4HP09960 611 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms