RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TSPYL2Q9H2G4 693 aaPredicted RBP14.17□□□□□ -0.14
SRP54-202ENST00000546080 GIT1Q9Y2X7 761 aa14.17□□□□□ -0.14
SRP54-202ENST00000546080 NRCAMQ92823 1304 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 C16orf96A6NNT2 1141 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 AQP9O43315 295 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 CDK14O94921 469 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 AKAP5P24588 427 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 RPS12P25398 132 aaKnown RBP14.16□□□□□ -0.14
SRP54-202ENST00000546080 GJA8P48165 433 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 KCNC1P48547 511 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 ARSFP54793 590 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 SPCS2Q15005 226 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 SKIV2LQ15477 1246 aaKnown RBP14.16□□□□□ -0.14
SRP54-202ENST00000546080 PERM1Q5SV97 790 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 TAF2Q6P1X5 1199 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 R3HCC1LQ7Z5L2 792 aaKnown RBP14.16□□□□□ -0.14
SRP54-202ENST00000546080 THAP5Q7Z6K1 395 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 ISCA2Q86U28 154 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 CLEC4FQ8N1N0 589 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 TTC30BQ8N4P2 665 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 PTGR2Q8N8N7 351 aaPredicted RBP14.16□□□□□ -0.14
SRP54-202ENST00000546080 BIRC7Q96CA5 298 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 NXF3Q9H4D5 531 aaKnown RBP14.16□□□□□ -0.14
SRP54-202ENST00000546080 KIAA1522Q9P206 1035 aaPredicted RBP14.16□□□□□ -0.14
SRP54-202ENST00000546080 POLG2Q9UHN1 485 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 OAS3Q9Y6K5 1087 aaKnown RBP14.16□□□□□ -0.14
SRP54-202ENST00000546080 A0A1W2PP18 115 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 H0Y858 1186 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 UBXN8O00124 270 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 F9P00740 461 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 FGF4P08620 206 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 ZNF286BP0CG31 522 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 THRBP10828 461 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 WARSP23381 471 aaKnown RBP14.16□□□□□ -0.14
SRP54-202ENST00000546080 CRHBPP24387 322 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 HPCAL1P37235 193 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 ALDH3A2P51648 485 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 KPNA1P52294 538 aaPredicted RBP14.16□□□□□ -0.14
SRP54-202ENST00000546080 FOXA1P55317 472 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 TPD52P55327 224 aaPredicted RBP14.16□□□□□ -0.14
SRP54-202ENST00000546080 DAG1Q14118 895 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 CBX2Q14781 532 aaPredicted RBP14.16□□□□□ -0.14
SRP54-202ENST00000546080 BCL2A1Q16548 175 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 PYCR3Q53H96 274 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 CRTC3Q6UUV7 619 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 TMEM207Q6UWW9 146 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 CATSPER4Q7RTX7 472 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 BTLAQ7Z6A9 289 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 RAB44Q7Z6P3 723 aaPredicted RBP14.16□□□□□ -0.14
SRP54-202ENST00000546080 PROSER1Q86XN7 944 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 C8orf59Q8N0T1 100 aaPredicted RBP14.16□□□□□ -0.14
SRP54-202ENST00000546080 SPARTQ8N0X7 666 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 PARP8Q8N3A8 854 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 ZNF419Q96HQ0 510 aaPredicted RBP14.16□□□□□ -0.14
SRP54-202ENST00000546080 PPP1R2P1Q96PQ5 205 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 GOLGA2P5Q9HBQ8 144 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 MAGEE1Q9HCI5 957 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 HPS4Q9NQG7 708 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 TLR9Q9NR96 1032 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 BTRCQ9Y297 605 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 PCDHGA11Q9Y5H2 935 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 ST14Q9Y5Y6 855 aa14.16□□□□□ -0.14
SRP54-202ENST00000546080 COL1A2P08123 1366 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 CCDC162PA2VCL2 907 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 H3BMM5 538 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 ALOX5P09917 674 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 USP17L7P0C7H9 530 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 LINC00032P0C843 101 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 ZNF24P17028 368 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 HOXA11P31270 313 aaPredicted RBP14.15□□□□□ -0.14
SRP54-202ENST00000546080 CASP2P42575 452 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 GMPSP49915 693 aaPredicted RBP14.15□□□□□ -0.14
SRP54-202ENST00000546080 CDKN2DP55273 166 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 EEFSECP57772 596 aaKnown RBP14.15□□□□□ -0.14
SRP54-202ENST00000546080 TRIM32Q13049 653 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 PCSK7Q16549 785 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 GJC2Q5T442 439 aaPredicted RBP14.15□□□□□ -0.14
SRP54-202ENST00000546080 KANK2Q63ZY3 851 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 ALKAL1Q6UXT8 129 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 CTU1Q7Z7A3 348 aaKnown RBP14.15□□□□□ -0.14
SRP54-202ENST00000546080 RYBPQ8N488 228 aaPredicted RBP14.15□□□□□ -0.14
SRP54-202ENST00000546080 MINDY2Q8NBR6 621 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 EDEM1Q92611 657 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 RNF34Q969K3 372 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 VPS33AQ96AX1 596 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 ERLEC1Q96DZ1 483 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 TMEM74Q96NL1 305 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 KCNA7Q96RP8 456 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 CYP2S1Q96SQ9 504 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 IL12RB2Q99665 862 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 FUNDC2Q9BWH2 189 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 DGCR6LQ9BY27 220 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 SLC52A3Q9NQ40 469 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 KLK14Q9P0G3 267 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 SLC27A5Q9Y2P5 690 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 ZNF236Q9UL36 1845 aa14.15□□□□□ -0.14
SRP54-202ENST00000546080 TYW5A2RUC4 315 aaKnown RBP14.15□□□□□ -0.15
SRP54-202ENST00000546080 PPP6CO00743 305 aa14.15□□□□□ -0.15
SRP54-202ENST00000546080 TNPO2O14787 897 aaKnown RBP14.15□□□□□ -0.15
SRP54-202ENST00000546080 BCAS1O75363 584 aaPredicted RBP14.15□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms