RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 MAP3K6O95382 1288 aa14.61□□□□□ -0.07
RTN3-214ENST00000545432 DLSTP36957 453 aa14.61□□□□□ -0.07
RTN3-214ENST00000545432 HSPA9P38646 679 aaKnown RBP14.61□□□□□ -0.07
RTN3-214ENST00000545432 TPI1P60174 286 aa14.61□□□□□ -0.07
RTN3-214ENST00000545432 ERV3-1Q14264 604 aa14.61□□□□□ -0.07
RTN3-214ENST00000545432 IL11RAQ14626 422 aa14.61□□□□□ -0.07
RTN3-214ENST00000545432 RALGPS1Q5JS13 557 aa14.61□□□□□ -0.07
RTN3-214ENST00000545432 SNAP47Q5SQN1 464 aa14.61□□□□□ -0.07
RTN3-214ENST00000545432 TMCO4Q5TGY1 634 aa14.61□□□□□ -0.07
RTN3-214ENST00000545432 RAET1GQ6H3X3 334 aa14.61□□□□□ -0.07
RTN3-214ENST00000545432 SCYL2Q6P3W7 929 aa14.61□□□□□ -0.07
RTN3-214ENST00000545432 ARHGAP36Q6ZRI8 547 aa14.61□□□□□ -0.07
RTN3-214ENST00000545432 ZNF765Q7L2R6 523 aa14.61□□□□□ -0.07
RTN3-214ENST00000545432 EFCAB3Q8N7B9 438 aa14.61□□□□□ -0.07
RTN3-214ENST00000545432 NUDCD1Q96RS6 583 aa14.61□□□□□ -0.07
RTN3-214ENST00000545432 SELENOOQ9BVL4 669 aa14.61□□□□□ -0.07
RTN3-214ENST00000545432 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.61□□□□□ -0.07
RTN3-214ENST00000545432 GANQ9H2C0 597 aa14.61□□□□□ -0.07
RTN3-214ENST00000545432 TMEM98Q9Y2Y6 226 aa14.61□□□□□ -0.07
RTN3-214ENST00000545432 PCDHGC4Q9Y5F7 938 aa14.61□□□□□ -0.07
RTN3-214ENST00000545432 PCYT1BQ9Y5K3 369 aaPredicted RBP14.61□□□□□ -0.07
RTN3-214ENST00000545432 TRBV23OR9-2A0A075B6M9 112 aa14.6□□□□□ -0.07
RTN3-214ENST00000545432 NPIPB15A6NHN6 443 aaPredicted RBP14.6□□□□□ -0.07
RTN3-214ENST00000545432 CREG1O75629 220 aa14.6□□□□□ -0.07
RTN3-214ENST00000545432 CALB1P05937 261 aa14.6□□□□□ -0.07
RTN3-214ENST00000545432 PYGLP06737 847 aa14.6□□□□□ -0.07
RTN3-214ENST00000545432 CYP2A6P11509 494 aaPredicted RBP14.6□□□□□ -0.07
RTN3-214ENST00000545432 ERCC2P18074 760 aa14.6□□□□□ -0.07
RTN3-214ENST00000545432 NFKBIAP25963 317 aa14.6□□□□□ -0.07
RTN3-214ENST00000545432 HCAR3P49019 387 aa14.6□□□□□ -0.07
RTN3-214ENST00000545432 JAM2P57087 298 aa14.6□□□□□ -0.07
RTN3-214ENST00000545432 SLC10A7Q0GE19 358 aa14.6□□□□□ -0.07
RTN3-214ENST00000545432 LBRQ14739 615 aaKnown RBP14.6□□□□□ -0.07
RTN3-214ENST00000545432 MON1BQ7L1V2 547 aa14.6□□□□□ -0.07
RTN3-214ENST00000545432 MAMDC2Q7Z304 686 aaPredicted RBP14.6□□□□□ -0.07
RTN3-214ENST00000545432 TMEM135Q86UB9 458 aa14.6□□□□□ -0.07
RTN3-214ENST00000545432 PLXDC1Q8IUK5 500 aa14.6□□□□□ -0.07
RTN3-214ENST00000545432 FAM114A1Q8IWE2 563 aa14.6□□□□□ -0.07
RTN3-214ENST00000545432 MLKLQ8NB16 471 aa14.6□□□□□ -0.07
RTN3-214ENST00000545432 PIH1D2Q8WWB5 315 aa14.6□□□□□ -0.07
RTN3-214ENST00000545432 C9orf72Q96LT7 481 aa14.6□□□□□ -0.07
RTN3-214ENST00000545432 ULBP3Q9BZM4 244 aa14.6□□□□□ -0.07
RTN3-214ENST00000545432 OGFRQ9NZT2 677 aa14.6□□□□□ -0.07
RTN3-214ENST00000545432 VPS18Q9P253 973 aa14.6□□□□□ -0.07
RTN3-214ENST00000545432 TBC1D29Q9UFV1 150 aa14.6□□□□□ -0.07
RTN3-214ENST00000545432 KIR2DS5A0A0G2JLQ3 304 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 A0A0G2JNG1 304 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 OR5K4A6NMS3 321 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 KIR2DS3K7RE56 304 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 FZD6O60353 706 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 GFPT2O94808 682 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 CPP00450 1065 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 FGF5P12034 268 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 DCTP40126 519 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 GPR1P46091 355 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 CLCNKAP51800 687 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 RPL7AP62424 266 aaKnown RBP14.59□□□□□ -0.07
RTN3-214ENST00000545432 UBE2IP63279 158 aaKnown RBP14.59□□□□□ -0.07
RTN3-214ENST00000545432 PTSQ03393 145 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 TRAF2Q12933 501 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 LAMB3Q13751 1172 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 KIR2DS5Q14953 304 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 CLEC16AQ2KHT3 1053 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 ZNF787Q6DD87 383 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 RFLNAQ6ZTI6 216 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 SLC9B2Q86UD5 537 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 TSPAN33Q86UF1 283 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 GALNT13Q8IUC8 556 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 PGBD5Q8N414 524 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 NPWQ8N729 165 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 MGME1Q9BQP7 344 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 HERPUD2Q9BSE4 406 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 TRIM55Q9BYV6 548 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 SP110Q9HB58 689 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 NOD2Q9HC29 1040 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 SEMA5BQ9P283 1151 aa14.59□□□□□ -0.07
RTN3-214ENST00000545432 CNOT6Q9ULM6 557 aaKnown RBP14.59□□□□□ -0.07
RTN3-214ENST00000545432 TTC24A2A3L6 582 aaPredicted RBP14.58□□□□□ -0.08
RTN3-214ENST00000545432 C21orf140B9A014 251 aa14.58□□□□□ -0.08
RTN3-214ENST00000545432 INPP4BO15327 924 aa14.58□□□□□ -0.08
RTN3-214ENST00000545432 PGLSO95336 258 aa14.58□□□□□ -0.08
RTN3-214ENST00000545432 CLDN1O95832 211 aa14.58□□□□□ -0.08
RTN3-214ENST00000545432 TNFAIP3P21580 790 aa14.58□□□□□ -0.08
RTN3-214ENST00000545432 SOX5P35711 763 aa14.58□□□□□ -0.08
RTN3-214ENST00000545432 NSFP46459 744 aaKnown RBP14.58□□□□□ -0.08
RTN3-214ENST00000545432 OGDHQ02218 1023 aa14.58□□□□□ -0.08
RTN3-214ENST00000545432 NFATC2Q13469 925 aa14.58□□□□□ -0.08
RTN3-214ENST00000545432 PTPRRQ15256 657 aa14.58□□□□□ -0.08
RTN3-214ENST00000545432 CA9Q16790 459 aa14.58□□□□□ -0.08
RTN3-214ENST00000545432 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.58□□□□□ -0.08
RTN3-214ENST00000545432 DOK6Q6PKX4 331 aa14.58□□□□□ -0.08
RTN3-214ENST00000545432 RFX8Q6ZV50 586 aa14.58□□□□□ -0.08
RTN3-214ENST00000545432 ARFGAP1Q8N6T3 406 aa14.58□□□□□ -0.08
RTN3-214ENST00000545432 AVL9Q8NBF6 648 aa14.58□□□□□ -0.08
RTN3-214ENST00000545432 GALNT6Q8NCL4 622 aa14.58□□□□□ -0.08
RTN3-214ENST00000545432 EXD1Q8NHP7 514 aa14.58□□□□□ -0.08
RTN3-214ENST00000545432 THAP4Q8WY91 577 aa14.58□□□□□ -0.08
RTN3-214ENST00000545432 SCAMP4Q969E2 229 aa14.58□□□□□ -0.08
RTN3-214ENST00000545432 AP2M1Q96CW1 435 aa14.58□□□□□ -0.08
RTN3-214ENST00000545432 AGAP2Q99490 1192 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms