RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 ISCA2Q86U28 154 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 GPR26Q8NDV2 337 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 OR6Y1Q8NGX8 325 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 SKA1Q96BD8 255 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 MARK4Q96L34 752 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 RPP25Q9BUL9 199 aaKnown RBP13.62□□□□□ -0.23
HCFC2-202ENST00000544223 MRPL46Q9H2W6 279 aaKnown RBP13.62□□□□□ -0.23
HCFC2-202ENST00000544223 SLC28A3Q9HAS3 691 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 SLC25A13Q9UJS0 675 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 ANKRD6Q9Y2G4 727 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 VPS13AQ96RL7 3174 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 CDC7O00311 574 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 LEFTY1O75610 366 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 LTA4HP09960 611 aaKnown RBP13.62□□□□□ -0.23
HCFC2-202ENST00000544223 POLR2EP19388 210 aaKnown RBP13.62□□□□□ -0.23
HCFC2-202ENST00000544223 CHRM3P20309 590 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 HMGCLP35914 325 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 CDH13P55290 713 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 SNRPD1P62314 119 aaKnown RBP13.62□□□□□ -0.23
HCFC2-202ENST00000544223 RCN2Q14257 317 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 FAM83EQ2M2I3 478 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 WDR75Q8IWA0 830 aaKnown RBP13.62□□□□□ -0.23
HCFC2-202ENST00000544223 TRIM42Q8IWZ5 723 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 LKAAEAR1Q8TD35 194 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 MRGPRX3Q96LB0 322 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 AARSD1Q9BTE6 412 aaKnown RBP13.62□□□□□ -0.23
HCFC2-202ENST00000544223 PLA2G2FQ9BZM2 168 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 SUV39H2Q9H5I1 410 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 COG4Q9H9E3 785 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 UTP6Q9NYH9 597 aaKnown RBP13.62□□□□□ -0.23
HCFC2-202ENST00000544223 ERVW-1Q9UQF0 538 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 ITM2BQ9Y287 266 aa13.62□□□□□ -0.23
HCFC2-202ENST00000544223 A8MT66 165 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 ZNF195O14628 629 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 TULP3O75386 442 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 ADH5P11766 374 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 ZNF37AP17032 561 aaPredicted RBP13.61□□□□□ -0.23
HCFC2-202ENST00000544223 CES1P23141 567 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 DDX6P26196 483 aaKnown RBP eCLIP13.61□□□□□ -0.23
HCFC2-202ENST00000544223 SERPINA4P29622 427 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 PTSQ03393 145 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 CHRNA6Q15825 494 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 TYSND1Q2T9J0 566 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 LIPMQ5VYY2 423 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 TRIM67Q6ZTA4 783 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 GPR150Q8NGU9 434 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 EEF1AKMT1Q8WVE0 214 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 NUF2Q9BZD4 464 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 ASB8Q9H765 288 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 ATXN2Q99700 1313 aaKnown RBP13.61□□□□□ -0.23
HCFC2-202ENST00000544223 A0A1B0GTL3 188 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 HEPACAM2A8MVW5 462 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 E9PBE3 544 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 KLHL41O60662 606 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 FSBPO95073 299 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 TGDSO95455 350 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 KRT16P08779 473 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 CD1DP15813 335 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 EPHA3P29320 983 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 DGKGP49619 791 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 IDH3AP50213 366 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 PDCD2Q16342 344 aaPredicted RBP13.61□□□□□ -0.23
HCFC2-202ENST00000544223 CARD16Q5EG05 197 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 ZNF648Q5T619 568 aaPredicted RBP13.61□□□□□ -0.23
HCFC2-202ENST00000544223 ELMSAN1Q6PJG2 1045 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 SERPINA9Q86WD7 417 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 CELF5Q8N6W0 485 aaKnown RBP13.61□□□□□ -0.23
HCFC2-202ENST00000544223 SCAMP4Q969E2 229 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 ASB16Q96NS5 453 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 NSUN5Q96P11 429 aaKnown RBP13.61□□□□□ -0.23
HCFC2-202ENST00000544223 OR52B2Q96RD2 323 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 KXD1Q9BQD3 176 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 MAGEE1Q9HCI5 957 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.61□□□□□ -0.23
HCFC2-202ENST00000544223 SARDHQ9UL12 918 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 SCN8AQ9UQD0 1980 aa13.61□□□□□ -0.23
HCFC2-202ENST00000544223 A0A087X1B8 175 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 NPEPPSL1A6NEC2 478 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 ZNF197O14709 1029 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 DCTN3O75935 186 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 WISP3O95389 354 aaPredicted RBP13.6□□□□□ -0.23
HCFC2-202ENST00000544223 ENO1P06733 434 aaKnown RBP13.6□□□□□ -0.23
HCFC2-202ENST00000544223 FSHRP23945 695 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 ERFP50548 548 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 TSNQ15631 228 aaKnown RBP13.6□□□□□ -0.23
HCFC2-202ENST00000544223 DBN1Q16643 649 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 FAM45BPQ6NSW5 357 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 DET1Q7L5Y6 550 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 CPNE9Q8IYJ1 553 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 POU5F2Q8N7G0 328 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 DCBLD1Q8N8Z6 715 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 SNX31Q8N9S9 440 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 FAM45AQ8TCE6 357 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 KLHL29Q96CT2 875 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 MRPL57Q9BQC6 102 aaKnown RBP13.6□□□□□ -0.23
HCFC2-202ENST00000544223 NCKIPSDQ9NZQ3 722 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 FAM8A1Q9UBU6 413 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 B4GALT6Q9UBX8 382 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 KRT87PA6NCN2 255 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 SKAP2O75563 359 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms