RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 CHSY1Q86X52 802 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 DCAKDQ8WVC6 231 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 JPH3Q8WXH2 748 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 QKIQ96PU8 341 aaKnown RBP eCLIP7.99□□□□□ -1.132e-9■■■■■ 73.6
PDLIM5-221ENST00000542407 UNC93B1Q9H1C4 597 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 SIAEQ9HAT2 523 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 PNPLA8Q9NP80 782 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 PAQR5Q9NXK6 330 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 PLK2Q9NYY3 685 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 DTLQ9NZJ0 730 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 LUZP4Q9P127 313 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 ATP6V1HQ9UI12 483 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 VWA8A3KMH1 1905 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 ZNF638Q14966 1978 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 J3QRK9 145 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 M0QYT0 321 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 KPNA5O15131 536 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 RAD51BO15315 384 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 DNAJB5O75953 348 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 ECDO95905 644 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 IFNA14P01570 189 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 LTFP02788 710 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 ATP5BP06576 529 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 ICAM2P13598 275 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 PSMC3P17980 439 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 RBL1P28749 1068 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 MAGEA6P43360 314 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 CLCN4P51793 760 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 ATN1P54259 1190 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 LEXMQ3ZCV2 418 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 ARTNQ5T4W7 220 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 FAM91A1Q658Y4 838 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 GLB1LQ6UWU2 654 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 METTL23Q86XA0 190 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 RNF148Q8N7C7 305 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 PPHLN1Q8NEY8 458 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 SLC9A6Q92581 669 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 NTAN1Q96AB6 310 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 FBXL8Q96CD0 374 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 SLC9A7Q96T83 725 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 GAL3ST1Q99999 423 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 C1orf21Q9H246 121 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 ARNT2Q9HBZ2 717 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 GIN1Q9NXP7 522 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 TAS2R7Q9NYW3 318 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 RAB26Q9ULW5 256 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 STAP1Q9ULZ2 295 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 APOBEC2Q9Y235 224 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 SF3B1O75533 1304 aaKnown RBP eCLIP7.99□□□□□ -1.132e-6■■■■■ 150.1
PDLIM5-221ENST00000542407 PLXNA3P51805 1871 aa7.99□□□□□ -1.13
PDLIM5-221ENST00000542407 SLC12A8A0AV02 714 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 KBTBD13C9JR72 458 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 FAM72CH0Y354 149 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 TRIM77I1YAP6 450 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 OAZ2O95190 189 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 GUCA1CO95843 209 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 IGLV3-25P01717 112 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 RPL10P27635 214 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 NKX2-5P52952 324 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 ZNF33BQ06732 778 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 APOFQ13790 326 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 SNAP47Q5SQN1 464 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 FAM72AQ5TYM5 149 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 CES4AQ5XG92 561 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 KRT80Q6KB66 452 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 FAM72DQ6L9T8 149 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 FAM72BQ86X60 149 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 FBXW8Q8N3Y1 598 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 FANK1Q8TC84 345 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 ATP2A3Q93084 1043 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 EME1Q96AY2 570 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 PLEKHA8Q96JA3 519 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 CASD1Q96PB1 797 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 FTHL17Q9BXU8 183 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 C20orf27Q9GZN8 174 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 ACSS3Q9H6R3 686 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 ELAC1Q9H777 363 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 TMEM161AQ9NX61 479 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 PSMD13Q9UNM6 376 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 ERVK-11Q9UQG0 969 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 IFT52Q9Y366 437 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 COL4A6Q14031 1691 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 C1orf232A0A0U1RR37 186 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 TRIM49D1C9J1S8 452 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 GIPC1O14908 333 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 CHADO15335 359 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 CFLARO15519 480 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 KCNN4O15554 427 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 MFSD11O43934 449 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 LYPLA1O75608 230 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 DHRS4L1P0CG22 281 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 TMEM11P17152 192 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 AIF1P55008 147 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 RPL26P61254 145 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 RHAGQ02094 409 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 TBCCQ15814 346 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 NPTX1Q15818 432 aa7.98□□□□□ -1.13
PDLIM5-221ENST00000542407 RBM20Q5T481 1227 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms