RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 ERVPABLB-1P60509 514 aa16.32■□□□□ 0.2
CCND1-205ENST00000542367 ADCY2Q08462 1091 aa16.32■□□□□ 0.2
CCND1-205ENST00000542367 PRKD1Q15139 912 aaPredicted RBP16.32■□□□□ 0.2
CCND1-205ENST00000542367 PCSK7Q16549 785 aa16.32■□□□□ 0.2
CCND1-205ENST00000542367 TFDP3Q5H9I0 405 aa16.32■□□□□ 0.2
CCND1-205ENST00000542367 MARK2Q7KZI7 788 aaKnown RBP16.32■□□□□ 0.2
CCND1-205ENST00000542367 B3GNT8Q7Z7M8 397 aa16.32■□□□□ 0.2
CCND1-205ENST00000542367 C17orf82Q86X59 251 aaPredicted RBP16.32■□□□□ 0.2
CCND1-205ENST00000542367 KATNAL2Q8IYT4 538 aa16.32■□□□□ 0.2
CCND1-205ENST00000542367 RCOR2Q8IZ40 523 aa16.32■□□□□ 0.2
CCND1-205ENST00000542367 UNC13CQ8NB66 2214 aa16.32■□□□□ 0.2
CCND1-205ENST00000542367 SPATA22Q8NHS9 363 aa16.32■□□□□ 0.2
CCND1-205ENST00000542367 WDR36Q8NI36 951 aaKnown RBP16.32■□□□□ 0.2
CCND1-205ENST00000542367 TFB1MQ8WVM0 346 aaKnown RBP16.32■□□□□ 0.2
CCND1-205ENST00000542367 TADA1Q96BN2 335 aa16.32■□□□□ 0.2
CCND1-205ENST00000542367 NAF1Q96HR8 494 aaKnown RBP16.32■□□□□ 0.2
CCND1-205ENST00000542367 COX14Q96I36 57 aa16.32■□□□□ 0.2
CCND1-205ENST00000542367 SLC46A1Q96NT5 459 aa16.32■□□□□ 0.2
CCND1-205ENST00000542367 PANX2Q96RD6 677 aa16.32■□□□□ 0.2
CCND1-205ENST00000542367 TRIB3Q96RU7 358 aa16.32■□□□□ 0.2
CCND1-205ENST00000542367 FAM83DQ9H4H8 585 aa16.32■□□□□ 0.2
CCND1-205ENST00000542367 GLOD4Q9HC38 313 aa16.32■□□□□ 0.2
CCND1-205ENST00000542367 PKD2L2Q9NZM6 624 aa16.32■□□□□ 0.2
CCND1-205ENST00000542367 PCDHGA8Q9Y5G5 932 aa16.32■□□□□ 0.2
CCND1-205ENST00000542367 NBEAQ8NFP9 2946 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 CCDC187A0A096LP49 1063 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 PMS2P1A4D2B8 440 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 D6RAR5 112 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 NDUFA10O95299 355 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 ECEL1O95672 775 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 MT-CYBP00156 380 aaPredicted RBP16.31■□□□□ 0.2
CCND1-205ENST00000542367 ATP1A1P05023 1023 aaKnown RBP16.31■□□□□ 0.2
CCND1-205ENST00000542367 PIRTP0C851 137 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 PTPN3P26045 913 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 MARCKSL1P49006 195 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 MAZP56270 477 aaKnown RBP16.31■□□□□ 0.2
CCND1-205ENST00000542367 PCBP4P57723 403 aaKnown RBP16.31■□□□□ 0.2
CCND1-205ENST00000542367 CDK18Q07002 472 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 PYCR3Q53H96 274 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 HENMT1Q5T8I9 393 aaKnown RBP16.31■□□□□ 0.2
CCND1-205ENST00000542367 C11orf63Q6NUN7 778 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 IGF2-ASQ6U949 168 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 LYSMD3Q7Z3D4 306 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 SPRED1Q7Z699 444 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 TMTC1Q8IUR5 882 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 CCDC50Q8IVM0 306 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 ZNF248Q8NDW4 579 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 P3H4Q92791 437 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 EID2BQ96D98 161 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 TEKT5Q96M29 485 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 OR2M4Q96R27 311 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 FOXP3Q9BZS1 431 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 CDH19Q9H159 772 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 ZFYVE1Q9HBF4 777 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 THSD1Q9NS62 852 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 ATXN7L1Q9ULK2 861 aaPredicted RBP16.31■□□□□ 0.2
CCND1-205ENST00000542367 CNOT6Q9ULM6 557 aaKnown RBP16.31■□□□□ 0.2
CCND1-205ENST00000542367 SHOC2Q9UQ13 582 aa16.31■□□□□ 0.2
CCND1-205ENST00000542367 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.31■□□□□ 0.2
CCND1-205ENST00000542367 OAS3Q9Y6K5 1087 aaKnown RBP16.31■□□□□ 0.2
CCND1-205ENST00000542367 LOC400499M0QZD8 3231 aa16.3■□□□□ 0.2
CCND1-205ENST00000542367 hCG_1818297A0A087WSY0 165 aa16.3■□□□□ 0.2
CCND1-205ENST00000542367 RGSL1A5PLK6 1076 aa16.3■□□□□ 0.2
CCND1-205ENST00000542367 RCCD1A6NED2 376 aa16.3■□□□□ 0.2
CCND1-205ENST00000542367 FADS2P1A8MWK0 482 aa16.3■□□□□ 0.2
CCND1-205ENST00000542367 TMX2-CTNND1H3BSU7 103 aa16.3■□□□□ 0.2
CCND1-205ENST00000542367 TNFSF15O95150 251 aa16.3■□□□□ 0.2
CCND1-205ENST00000542367 ACTR1BP42025 376 aa16.3■□□□□ 0.2
CCND1-205ENST00000542367 INHBCP55103 352 aa16.3■□□□□ 0.2
CCND1-205ENST00000542367 ACTR1AP61163 376 aa16.3■□□□□ 0.2
CCND1-205ENST00000542367 B4GALNT1Q00973 533 aa16.3■□□□□ 0.2
CCND1-205ENST00000542367 PEX6Q13608 980 aa16.3■□□□□ 0.2
CCND1-205ENST00000542367 DAAM2Q86T65 1068 aa16.3■□□□□ 0.2
CCND1-205ENST00000542367 ZC3H18Q86VM9 953 aaKnown RBP16.3■□□□□ 0.2
CCND1-205ENST00000542367 GALNT13Q8IUC8 556 aa16.3■□□□□ 0.2
CCND1-205ENST00000542367 SPACA3Q8IXA5 215 aa16.3■□□□□ 0.2
CCND1-205ENST00000542367 NAGSQ8N159 534 aa16.3■□□□□ 0.2
CCND1-205ENST00000542367 ARL14Q8N4G2 192 aa16.3■□□□□ 0.2
CCND1-205ENST00000542367 PATE1Q8WXA2 126 aa16.3■□□□□ 0.2
CCND1-205ENST00000542367 KRT35Q92764 455 aa16.3■□□□□ 0.2
CCND1-205ENST00000542367 LIN37Q96GY3 246 aaPredicted RBP16.3■□□□□ 0.2
CCND1-205ENST00000542367 TMEM74Q96NL1 305 aa16.3■□□□□ 0.2
CCND1-205ENST00000542367 STRADBQ9C0K7 418 aa16.3■□□□□ 0.2
CCND1-205ENST00000542367 MAGEE1Q9HCI5 957 aa16.3■□□□□ 0.2
CCND1-205ENST00000542367 EPB41L5Q9HCM4 733 aa16.3■□□□□ 0.2
CCND1-205ENST00000542367 UBP1Q9NZI7 540 aa16.3■□□□□ 0.2
CCND1-205ENST00000542367 ZNHIT2Q9UHR6 403 aa16.3■□□□□ 0.2
CCND1-205ENST00000542367 RHPN2P1A8MT19 583 aa16.29■□□□□ 0.2
CCND1-205ENST00000542367 B4GAT1O43505 415 aa16.29■□□□□ 0.2
CCND1-205ENST00000542367 PMPCBO75439 489 aa16.29■□□□□ 0.2
CCND1-205ENST00000542367 HOXB3P14651 431 aaPredicted RBP16.29■□□□□ 0.2
CCND1-205ENST00000542367 FECHP22830 423 aa16.29■□□□□ 0.2
CCND1-205ENST00000542367 CD68P34810 354 aaPredicted RBP16.29■□□□□ 0.2
CCND1-205ENST00000542367 OR1D5P58170 312 aa16.29■□□□□ 0.2
CCND1-205ENST00000542367 WASHC5Q12768 1159 aa16.29■□□□□ 0.2
CCND1-205ENST00000542367 SLC14A2Q15849 920 aa16.29■□□□□ 0.2
CCND1-205ENST00000542367 CCDC70Q6NSX1 233 aa16.29■□□□□ 0.2
CCND1-205ENST00000542367 TMC3Q7Z5M5 1100 aa16.29■□□□□ 0.2
CCND1-205ENST00000542367 GAS2L3Q86XJ1 694 aa16.29■□□□□ 0.2
CCND1-205ENST00000542367 FBXO39Q8N4B4 442 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms