RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 SARDHQ9UL12 918 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 HS3ST2Q9Y278 367 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 ANKRD66B4E2M5 251 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 ARNTLO00327 626 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 TRAFD1O14545 582 aaPredicted RBP7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 NDC80O14777 642 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 HOXC11O43248 304 aaPredicted RBP7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 LEFTY1O75610 366 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 USP1O94782 785 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 PAPLNO95428 1278 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 CLDN7O95471 211 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 NDST3O95803 873 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 TCF3P15923 654 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 KRT4P19013 534 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 PRKCHP24723 683 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 GABRB3P28472 473 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 SLC1A2P43004 574 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 ARCN1P48444 511 aaKnown RBP7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 NPY2RP49146 381 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 PLK1P53350 603 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 BCL2L1Q07817 233 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 HTR4Q13639 388 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 RFTN1Q14699 578 aaPredicted RBP7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 INO80DQ53TQ3 878 aaPredicted RBP7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 C2orf27AQ580R0 203 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 PPM1JQ5JR12 505 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 PCID2Q5JVF3 399 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 TEDDM1Q5T9Z0 273 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 PSAPL1Q6NUJ1 521 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 STRA8Q7Z7C7 330 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 LRRC6Q86X45 466 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 SPATA6LQ8N4H0 392 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 FRS2Q8WU20 508 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 MZB1Q8WU39 189 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 PTPRN2Q92932 1015 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 LRRC39Q96DD0 335 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 KLHL32Q96NJ5 620 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 GUCD1Q96NT3 240 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 SH3GL3Q99963 347 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 CCDC77Q9BR77 488 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 TRMT61BQ9BVS5 477 aaKnown RBP7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 KIFC1Q9BW19 673 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 FRMD8Q9BZ67 464 aaPredicted RBP7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 SLC13A1Q9BZW2 595 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 UBE2ZQ9H832 354 aaPredicted RBP7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 VPS45Q9NRW7 570 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 TREX1Q9NSU2 369 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 THG1LQ9NWX6 298 aaKnown RBP7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 CD84Q9UIB8 345 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 IKBKGQ9Y6K9 419 aa7.73□□□□□ -1.17
AC005840.3-201ENST00000541888 PLXNB3Q9ULL4 1909 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 PIKFYVEQ9Y2I7 2098 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 FAM237BA0A1B0GVD1 139 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 TMEM120BA0PK00 339 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 CCDC162PA2VCL2 907 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 FAM229AH3BQW9 127 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 MGRN1O60291 552 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 HAUS5O94927 633 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 PGLSO95336 258 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 IGSF6O95976 241 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 COL4A2P08572 1712 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 BRAFP15056 766 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 FOSL2P15408 326 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 CHN1P15882 459 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 ADRA1DP25100 572 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 HNF1BP35680 557 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 IL12RB1P42701 662 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 IRX4P78413 519 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 IRF9Q00978 393 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 RIPK1Q13546 671 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 ZNF234Q14588 700 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 KLHL38Q2WGJ6 581 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 MYLK3Q32MK0 819 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 SPANXN3Q5MJ09 141 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 TSTD2Q5T7W7 516 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 AGBL2Q5U5Z8 902 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 GRAMD4Q6IC98 578 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 CNSTQ6PJW8 725 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 PACS1Q6VY07 963 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 CDHR3Q6ZTQ4 885 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 CEP128Q6ZU80 1094 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 TRABD2AQ86V40 505 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 APLFQ8IW19 511 aaPredicted RBP7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 STK40Q8N2I9 435 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 DEFB123Q8N688 67 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 TERB1Q8NA31 727 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 PIH1D2Q8WWB5 315 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 OTUB2Q96DC9 234 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 PGM2Q96G03 612 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 ANKRD27Q96NW4 1050 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 PAIP2Q9BPZ3 127 aaKnown RBP7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 DHRS4Q9BTZ2 278 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 TRABDQ9H4I3 376 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 TRPV4Q9HBA0 871 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 ACSS2Q9NR19 701 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 SPATS2LQ9NUQ6 558 aaKnown RBP7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 PCMTD2Q9NV79 361 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 ELOVL2Q9NXB9 296 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 SLC17A7Q9P2U7 560 aa7.72□□□□□ -1.17
AC005840.3-201ENST00000541888 FBXO10Q9UK96 956 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms