RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	GRIN2C	Q14957	1233 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	NEDD8	Q15843	81 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ADRM1	Q16186	407 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	LDLRAP1	Q5SW96	308 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CERCAM	Q5T4B2	595 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	METTL21C	Q5VZV1	264 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CHSY3	Q70JA7	882 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	OSTM1	Q86WC4	334 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CBR4	Q8N4T8	237 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CYGB	Q8WWM9	190 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZNF597	Q96LX8	424 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CSPG4P5	Q96PW8	444 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	KCTD15	Q96SI1	283 aa	Predicted RBP	5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CXorf21	Q9HAI6	301 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CLK4	Q9HAZ1	481 aa	Known RBP	5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	OBP2A	Q9NY56	170 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GTSE1	Q9NYZ3	720 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	BCAP29	Q9UHQ4	241 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RUVBL2	Q9Y230	463 aa	Known RBP	5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	LOXHD1	Q8IVV2	1947 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783		A0A1W2PRU2	124 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	FUOM	A2VDF0	154 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TBC1D3B	A6NDS4	549 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783		H3BQ06	376 aa	Predicted RBP	5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CLDN5	O00501	218 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TRIM38	O00635	465 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	FBP2	O00757	339 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GABRD	O14764	452 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PPEF2	O14830	753 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	IRAK2	O43187	625 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ADAM23	O75077	832 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	POLB	P06746	335 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	POR	P16435	677 aa	Predicted RBP	5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	NR4A1	P22736	598 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SPR	P35270	261 aa	Predicted RBP	5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TXNL4A	P83876	142 aa	Known RBP	5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GNA12	Q03113	381 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PRKCQ	Q04759	706 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PMS2P3	Q13401	168 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TRIM25	Q14258	630 aa	Known RBP	5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZNF235	Q14590	738 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	POLD3	Q15054	466 aa	Predicted RBP	5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TRIP4	Q15650	581 aa	Predicted RBP	5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PPP1R3A	Q16821	1122 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	INSC	Q1MX18	579 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CCDC153	Q494R4	210 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	AGK	Q53H12	422 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	STEAP4	Q687X5	459 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	NANOGP8	Q6NSW7	305 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GPR180	Q86V85	440 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TTC30A	Q86WT1	665 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	DEFB106A	Q8N104	65 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CENPS	Q8N2Z9	138 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	OR9I1	Q8NGQ6	314 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CANT1	Q8WVQ1	401 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ING5	Q8WYH8	240 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	KHSRP	Q92945	711 aa	Known RBP eCLIP	5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	P2RY11	Q96G91	374 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TRMT2B	Q96GJ1	504 aa	Known RBP	5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	FBXL20	Q96IG2	436 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	COX4I2	Q96KJ9	171 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CLSTN3	Q9BQT9	956 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	OSBPL11	Q9BXB4	747 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZBTB26	Q9HCK0	441 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CYP4F12	Q9HCS2	524 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CHRAC1	Q9NRG0	131 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PNPLA3	Q9NST1	481 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TBC1D23	Q9NUY8	699 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CNOT6	Q9ULM6	557 aa	Known RBP	5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	AP4E1	Q9UPM8	1137 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	NCKAP1	Q9Y2A7	1128 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RBMX2	Q9Y388	322 aa	Known RBP	5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RAP2C	Q9Y3L5	183 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PCDHGA7	Q9Y5G6	932 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783		A0A0A0MRY4	1105 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ATP6AP2	A0A1C7CYW4	349 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	EEF2K	O00418	725 aa	Known RBP	5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TIMM44	O43615	452 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MFSD11	O43934	449 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SERPINB7	O75635	380 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ATP6AP2	O75787	350 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GABBR2	O75899	941 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	LATS1	O95835	1130 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MT-ND1	P03886	318 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZNF182	P17025	639 aa	Predicted RBP	5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TSPAN8	P19075	237 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	POLR2E	P19388	210 aa	Known RBP	5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GRIA3	P42263	894 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	HAL	P42357	657 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PPM1F	P49593	454 aa	Predicted RBP	5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TRAF2	Q12933	501 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ITGAD	Q13349	1161 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GRM3	Q14832	879 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PLCL1	Q15111	1095 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ITPRIPL2	Q3MIP1	535 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	AARS2	Q5JTZ9	985 aa	Known RBP	5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	NCBP2-AS2	Q69YL0	99 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SLC26A9	Q7LBE3	791 aa		5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SETD3	Q86TU7	594 aa	Predicted RBP	5.66	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	UBALD2	Q8IYN6	164 aa		5.66	□□□□□ -1.5

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