RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 ZNF106Q9H2Y7 1883 aaKnown RBP9.51□□□□□ -0.89
LCOR-209ENST00000540664 CXorf51AA0A1B0GTR3 108 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 UBA6A0AVT1 1052 aaPredicted RBP9.51□□□□□ -0.89
LCOR-209ENST00000540664 TYW5A2RUC4 315 aaKnown RBP9.51□□□□□ -0.89
LCOR-209ENST00000540664 SKAP2O75563 359 aaPredicted RBP9.51□□□□□ -0.89
LCOR-209ENST00000540664 MT-CO1P00395 513 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 TIMP1P01033 207 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 LINC00271P0C7V0 271 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 PKMP14618 531 aaKnown RBP9.51□□□□□ -0.89
LCOR-209ENST00000540664 CSF2RAP15509 400 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 PPM1AP35813 382 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 HMGCLP35914 325 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 CSNK1DP48730 415 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 RHOAP61586 193 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 SH3BP2P78314 561 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 ZRSR2Q15696 482 aaKnown RBP9.51□□□□□ -0.89
LCOR-209ENST00000540664 PTPRNQ16849 979 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 ZNF423Q2M1K9 1284 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 PIGGQ5H8A4 983 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 LILRA6Q6PI73 481 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 RNF111Q6ZNA4 994 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 KBTBD6Q86V97 674 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 MFN1Q8IWA4 741 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 NKAPQ8N5F7 415 aaKnown RBP9.51□□□□□ -0.89
LCOR-209ENST00000540664 GRIN3AQ8TCU5 1115 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 PIH1D2Q8WWB5 315 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 KCNJ9Q92806 393 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 USP13Q92995 863 aaPredicted RBP9.51□□□□□ -0.89
LCOR-209ENST00000540664 EID2BQ96D98 161 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 MARK4Q96L34 752 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 GPR21Q99679 349 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 LBHD1Q9BQE6 289 aaPredicted RBP9.51□□□□□ -0.89
LCOR-209ENST00000540664 P2RY12Q9H244 342 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 EFCAB1Q9HAE3 211 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 BATF3Q9NR55 127 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 GALPQ9UBC7 116 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 G3BP2Q9UN86 482 aaKnown RBP9.51□□□□□ -0.89
LCOR-209ENST00000540664 ZNF510Q9Y2H8 683 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 FCF1Q9Y324 198 aaKnown RBP9.51□□□□□ -0.89
LCOR-209ENST00000540664 ZNF711Q9Y462 761 aa9.51□□□□□ -0.89
LCOR-209ENST00000540664 SCN8AQ9UQD0 1980 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 STX16-NPEPL1H3BU86 382 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 STX16O14662 325 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 PFDN6O15212 129 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 STX7O15400 261 aaKnown RBP9.5□□□□□ -0.89
LCOR-209ENST00000540664 HTRA2O43464 458 aaPredicted RBP9.5□□□□□ -0.89
LCOR-209ENST00000540664 TGM5O43548 720 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 PGLSO95336 258 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 SIX3O95343 332 aaPredicted RBP9.5□□□□□ -0.89
LCOR-209ENST00000540664 PRAMEF12O95522 483 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 PYGLP06737 847 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 RPS17P08708 135 aaKnown RBP9.5□□□□□ -0.89
LCOR-209ENST00000540664 CTSAP10619 480 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 PTGER3P43115 390 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 PSMD8P48556 350 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 RPL26P61254 145 aaKnown RBP9.5□□□□□ -0.89
LCOR-209ENST00000540664 NAA20P61599 178 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 RAD51Q06609 339 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 CDH18Q13634 790 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 PTPRRQ15256 657 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 MUM1Q2TAK8 710 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 AARS2Q5JTZ9 985 aaKnown RBP9.5□□□□□ -0.89
LCOR-209ENST00000540664 KANK2Q63ZY3 851 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 RAB44Q7Z6P3 723 aaPredicted RBP9.5□□□□□ -0.89
LCOR-209ENST00000540664 KBTBD2Q8IY47 623 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 APCDD1Q8J025 514 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 FUBP1Q96AE4 644 aaKnown RBP9.5□□□□□ -0.89
LCOR-209ENST00000540664 ACDQ96AP0 544 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 FAM136AQ96C01 138 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 SERPINI1Q99574 410 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 SLC30A3Q99726 388 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 CCDC68Q9H2F9 335 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 PCDH10Q9P2E7 1040 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 SARDHQ9UL12 918 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 FAM50BQ9Y247 325 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 DNAJC15Q9Y5T4 150 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 SCAMP3O14828 347 aaKnown RBP9.5□□□□□ -0.89
LCOR-209ENST00000540664 LIN7AO14910 233 aaPredicted RBP9.5□□□□□ -0.89
LCOR-209ENST00000540664 UBDO15205 165 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 OR1I1O60431 355 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 CLASP2O75122 1294 aaKnown RBP9.5□□□□□ -0.89
LCOR-209ENST00000540664 VPS26AO75436 327 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 ECI2O75521 394 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 ESR1P03372 595 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 CNPP09543 421 aaKnown RBP9.5□□□□□ -0.89
LCOR-209ENST00000540664 ARSAP15289 507 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 GABRR2P28476 465 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 DPP6P42658 865 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 ACADVLP49748 655 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 CDKN3Q16667 212 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 PPP1R3AQ16821 1122 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 PFKFB4Q16877 469 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 ATXN7L2Q5T6C5 722 aaPredicted RBP9.5□□□□□ -0.89
LCOR-209ENST00000540664 CLEC6AQ6EIG7 209 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 RETSATQ6NUM9 610 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 BNC2Q6ZN30 1099 aaPredicted RBP9.5□□□□□ -0.89
LCOR-209ENST00000540664 RYBPQ8N488 228 aaPredicted RBP9.5□□□□□ -0.89
LCOR-209ENST00000540664 EFCAB3Q8N7B9 438 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 EFHBQ8N7U6 833 aa9.5□□□□□ -0.89
LCOR-209ENST00000540664 PPFIBP2Q8ND30 876 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms