RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 CDH4P55283 916 aa17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 STAG3L4Q8TBR4 150 aa17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 EEF1AKMT1Q8WVE0 214 aa17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 MYLIPQ8WY64 445 aa17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 PRICKLE1Q96MT3 831 aaPredicted RBP17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 TUBGCP5Q96RT8 1024 aa17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 SYTL2Q9HCH5 934 aa17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 TMEM39AQ9NV64 488 aa17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 BCAP29Q9UHQ4 241 aa17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 EIF2B4Q9UI10 523 aaKnown RBP17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 A0A1B0GVM2 712 aa17.02■□□□□ 0.31
EPB41L3-204ENST00000540638 TCAF2A6NFQ2 919 aa17.02■□□□□ 0.31
EPB41L3-204ENST00000540638 NPHS1O60500 1241 aa17.02■□□□□ 0.31
EPB41L3-204ENST00000540638 CHEK2O96017 543 aa17.02■□□□□ 0.31
EPB41L3-204ENST00000540638 CSKP41240 450 aa17.02■□□□□ 0.31
EPB41L3-204ENST00000540638 FAM189BP81408 668 aa17.02■□□□□ 0.31
EPB41L3-204ENST00000540638 PFKPQ01813 784 aa17.02■□□□□ 0.31
EPB41L3-204ENST00000540638 EIF4EBP2Q13542 120 aaPredicted RBP17.02■□□□□ 0.31
EPB41L3-204ENST00000540638 GRB7Q14451 532 aa17.02■□□□□ 0.31
EPB41L3-204ENST00000540638 C18orf21Q32NC0 220 aaPredicted RBP17.02■□□□□ 0.31
EPB41L3-204ENST00000540638 ADGRF1Q5T601 910 aa17.02■□□□□ 0.31
EPB41L3-204ENST00000540638 FAM91A1Q658Y4 838 aa17.02■□□□□ 0.31
EPB41L3-204ENST00000540638 IRGCQ6NXR0 463 aa17.02■□□□□ 0.31
EPB41L3-204ENST00000540638 DNAJC14Q6Y2X3 702 aaPredicted RBP17.02■□□□□ 0.31
EPB41L3-204ENST00000540638 CDC26Q8NHZ8 85 aa17.02■□□□□ 0.31
EPB41L3-204ENST00000540638 JADE3Q92613 823 aa17.02■□□□□ 0.31
EPB41L3-204ENST00000540638 YME1L1Q96TA2 773 aa17.02■□□□□ 0.31
EPB41L3-204ENST00000540638 SEC24DO94855 1032 aaPredicted RBP17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 VNN2O95498 520 aa17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 IMPDH1P20839 514 aa17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 PAX3P23760 479 aa17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 GRIA3P42263 894 aa17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 STC1P52823 247 aa17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 IKBKEQ14164 716 aa17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 UNC50Q53HI1 259 aa17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 ZNF678Q5SXM1 525 aa17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 TRAF7Q6Q0C0 670 aa17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 LYSMD3Q7Z3D4 306 aa17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 PQLC1Q8N2U9 271 aa17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 MTFMTQ96DP5 389 aaKnown RBP17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 TSC22D3Q99576 134 aa17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 SLC30A3Q99726 388 aa17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 ASB8Q9H765 288 aa17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 STK39Q9UEW8 545 aa17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 CRLS1Q9UJA2 301 aa17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 A0A0J9YYE9 177 aa17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 MAGEA13PA6NCF6 341 aa17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 CCNT2O60583 730 aaKnown RBP17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 SMNDC1O75940 238 aaKnown RBP eCLIP17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 DPP6P42658 865 aa17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 C6orf10Q5SRN2 563 aa17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 DET1Q7L5Y6 550 aa17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 GPSM1Q86YR5 675 aa17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 CLYBLQ8N0X4 340 aa17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 CIDEBQ9UHD4 219 aa17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 CROTQ9UKG9 612 aa17.01■□□□□ 0.31
EPB41L3-204ENST00000540638 A0A1B0GTL3 188 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 ANKRD66B4E2M5 251 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 ECI2O75521 394 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 CD1DP15813 335 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 GGT5P36269 586 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 DIO3P55073 304 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 TRAF2Q12933 501 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 PLA2G4EQ3MJ16 856 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 REP15Q6BDI9 236 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 LPGAT1Q92604 370 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 TBRG4Q969Z0 631 aaKnown RBP eCLIP17■□□□□ 0.31
EPB41L3-204ENST00000540638 FAM149AA5PLN7 773 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 TARM1B6A8C7 271 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 CDK14O94921 469 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 PRAMEF12O95522 483 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 S100BP04271 92 aaPredicted RBP17■□□□□ 0.31
EPB41L3-204ENST00000540638 PKMP14618 531 aaKnown RBP17■□□□□ 0.31
EPB41L3-204ENST00000540638 ETS2P15036 469 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 ALOX15P16050 662 aaPredicted RBP17■□□□□ 0.31
EPB41L3-204ENST00000540638 PSMC3P17980 439 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 EPHB3P54753 998 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 IL2P60568 153 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 CLCQ05315 142 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 TRIM60Q495X7 471 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 FNDC5Q8NAU1 212 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 CLSTN3Q9BQT9 956 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 SAC3D1A6NKF1 404 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 TMEM189-UBE2V1I3L0A0 370 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 NRP2O60462 931 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 HERVK_113P63132 956 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 MAPRE2Q15555 327 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 AFMIDQ63HM1 303 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 AFTPHQ6ULP2 937 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 PGAM4Q8N0Y7 254 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 PSKH2Q96QS6 385 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 AARSD1Q9BTE6 412 aaKnown RBP17■□□□□ 0.31
EPB41L3-204ENST00000540638 ERVK-6Q9BXR3 956 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 CLPBQ9H078 707 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 GSTO2Q9H4Y5 243 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 ARNT2Q9HBZ2 717 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 SUN2Q9UH99 717 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 DNAJC15Q9Y5T4 150 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 SQORQ9Y6N5 450 aa17■□□□□ 0.31
EPB41L3-204ENST00000540638 LOC285095A0A1B0GVY8 99 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms