RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 CNOT6Q9ULM6 557 aaKnown RBP14.99□□□□□ -0.01
UBE3B-212ENST00000540230 SUFUQ9UMX1 484 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 DOLKQ9UPQ8 538 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 SLC17A4Q9Y2C5 497 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 OAS3Q9Y6K5 1087 aaKnown RBP14.99□□□□□ -0.01
UBE3B-212ENST00000540230 EPG5Q9HCE0 2579 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 USP24Q9UPU5 2620 aa14.98□□□□□ -0.01
UBE3B-212ENST00000540230 CPED1A4D0V7 1026 aa14.98□□□□□ -0.01
UBE3B-212ENST00000540230 EME2A4GXA9 379 aaPredicted RBP14.98□□□□□ -0.01
UBE3B-212ENST00000540230 PDE2AO00408 941 aaPredicted RBP14.98□□□□□ -0.01
UBE3B-212ENST00000540230 CCDC175P0C221 793 aa14.98□□□□□ -0.01
UBE3B-212ENST00000540230 GNPDA1P46926 289 aa14.98□□□□□ -0.01
UBE3B-212ENST00000540230 NR0B2Q15466 257 aa14.98□□□□□ -0.01
UBE3B-212ENST00000540230 ALS2CLQ60I27 953 aa14.98□□□□□ -0.01
UBE3B-212ENST00000540230 EFL1Q7Z2Z2 1120 aaKnown RBP14.98□□□□□ -0.01
UBE3B-212ENST00000540230 TMPRSS12Q86WS5 348 aa14.98□□□□□ -0.01
UBE3B-212ENST00000540230 NRROSQ86YC3 692 aa14.98□□□□□ -0.01
UBE3B-212ENST00000540230 CCHCR1Q8TD31 782 aa14.98□□□□□ -0.01
UBE3B-212ENST00000540230 FAM83DQ9H4H8 585 aa14.98□□□□□ -0.01
UBE3B-212ENST00000540230 PLEKHM1Q9Y4G2 1056 aa14.98□□□□□ -0.01
UBE3B-212ENST00000540230 CAPNS1P04632 268 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 ATP1A1P05023 1023 aaKnown RBP14.97□□□□□ -0.01
UBE3B-212ENST00000540230 PROS1P07225 676 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 AK4P27144 223 aaPredicted RBP14.97□□□□□ -0.01
UBE3B-212ENST00000540230 GDF10P55107 478 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 MPP3Q13368 585 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 SLC1A5Q15758 541 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 MEI1Q5TIA1 1274 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 ZNF662Q6ZS27 426 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 MARK2Q7KZI7 788 aaKnown RBP14.97□□□□□ -0.01
UBE3B-212ENST00000540230 TAF8Q7Z7C8 310 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 GKN2Q86XP6 184 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 RAVER1Q8IY67 606 aaKnown RBP14.97□□□□□ -0.01
UBE3B-212ENST00000540230 TTC30BQ8N4P2 665 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 ATG4AQ8WYN0 398 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 HIC2Q96JB3 615 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 SPATA13Q96N96 652 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 GPR63Q9BZJ6 419 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 BPIFA1Q9NP55 256 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 ARFGAP3Q9NP61 516 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 GULP1Q9UBP9 304 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 RABGEF1Q9UJ41 708 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 GPR34Q9UPC5 381 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 ZFC3H1O60293 1989 aaKnown RBP14.97□□□□□ -0.01
UBE3B-212ENST00000540230 OPA1O60313 960 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 AGTP01019 485 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 IVLP07476 585 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 JUPP14923 745 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 BPIP17213 487 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 DUSP3P51452 185 aaPredicted RBP14.97□□□□□ -0.01
UBE3B-212ENST00000540230 TARDBPQ13148 414 aaKnown RBP eCLIP14.97□□□□□ -0.01
UBE3B-212ENST00000540230 ST3GAL2Q16842 350 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 ZNF648Q5T619 568 aaPredicted RBP14.97□□□□□ -0.01
UBE3B-212ENST00000540230 LVRNQ6Q4G3 990 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 ARL10Q8N8L6 244 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 FAM46DQ8NEK8 389 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 SLC35B2Q8TB61 432 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 SCARF2Q96GP6 870 aaPredicted RBP14.97□□□□□ -0.01
UBE3B-212ENST00000540230 APOL2Q9BQE5 337 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 FICDQ9BVA6 458 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 SPATS2LQ9NUQ6 558 aaKnown RBP14.97□□□□□ -0.01
UBE3B-212ENST00000540230 PADI4Q9UM07 663 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 PPP2R2CQ9Y2T4 447 aa14.97□□□□□ -0.01
UBE3B-212ENST00000540230 ZZEF1O43149 2961 aa14.96□□□□□ -0.01
UBE3B-212ENST00000540230 ZFHX4Q86UP3 3567 aa14.96□□□□□ -0.01
UBE3B-212ENST00000540230 RGSL1A5PLK6 1076 aa14.96□□□□□ -0.02
UBE3B-212ENST00000540230 GOLGA6L9A6NEM1 432 aa14.96□□□□□ -0.02
UBE3B-212ENST00000540230 GOLGA6L3A6NEY3 463 aa14.96□□□□□ -0.02
UBE3B-212ENST00000540230 B4DGG1 531 aa14.96□□□□□ -0.02
UBE3B-212ENST00000540230 BUD23O43709 281 aaKnown RBP14.96□□□□□ -0.02
UBE3B-212ENST00000540230 NOBOXO60393 691 aa14.96□□□□□ -0.02
UBE3B-212ENST00000540230 EPOP01588 193 aa14.96□□□□□ -0.02
UBE3B-212ENST00000540230 PTMAP06454 111 aaKnown RBP14.96□□□□□ -0.02
UBE3B-212ENST00000540230 GP1BAP07359 652 aa14.96□□□□□ -0.02
UBE3B-212ENST00000540230 CDK4P11802 303 aa14.96□□□□□ -0.02
UBE3B-212ENST00000540230 ADRA1AP35348 466 aa14.96□□□□□ -0.02
UBE3B-212ENST00000540230 ADCY8P40145 1251 aa14.96□□□□□ -0.02
UBE3B-212ENST00000540230 ITPRIPL1Q6GPH6 555 aa14.96□□□□□ -0.02
UBE3B-212ENST00000540230 CCDC70Q6NSX1 233 aa14.96□□□□□ -0.02
UBE3B-212ENST00000540230 SDR16C5Q8N3Y7 309 aa14.96□□□□□ -0.02
UBE3B-212ENST00000540230 FAM71DQ8N9W8 422 aa14.96□□□□□ -0.02
UBE3B-212ENST00000540230 TTC13Q8NBP0 860 aa14.96□□□□□ -0.02
UBE3B-212ENST00000540230 GPR156Q8NFN8 814 aa14.96□□□□□ -0.02
UBE3B-212ENST00000540230 MDM1Q8TC05 714 aa14.96□□□□□ -0.02
UBE3B-212ENST00000540230 BLOC1S5Q8TDH9 187 aa14.96□□□□□ -0.02
UBE3B-212ENST00000540230 GPBAR1Q8TDU6 330 aa14.96□□□□□ -0.02
UBE3B-212ENST00000540230 TMEM121Q9BTD3 319 aa14.96□□□□□ -0.02
UBE3B-212ENST00000540230 SPATA16Q9BXB7 569 aa14.96□□□□□ -0.02
UBE3B-212ENST00000540230 NFKBIL1Q9UBC1 381 aaPredicted RBP14.96□□□□□ -0.02
UBE3B-212ENST00000540230 PRKAB1Q9Y478 270 aa14.96□□□□□ -0.02
UBE3B-212ENST00000540230 TRABD2BA6NFA1 517 aa14.95□□□□□ -0.02
UBE3B-212ENST00000540230 DNAJC6O75061 913 aa14.95□□□□□ -0.02
UBE3B-212ENST00000540230 USP12O75317 370 aa14.95□□□□□ -0.02
UBE3B-212ENST00000540230 ASMTLO95671 621 aa14.95□□□□□ -0.02
UBE3B-212ENST00000540230 MT-CO3P00414 261 aa14.95□□□□□ -0.02
UBE3B-212ENST00000540230 PYGLP06737 847 aa14.95□□□□□ -0.02
UBE3B-212ENST00000540230 HLA-DPA1P20036 260 aa14.95□□□□□ -0.02
UBE3B-212ENST00000540230 GEMP55040 296 aa14.95□□□□□ -0.02
UBE3B-212ENST00000540230 DCDC1P59894 354 aa14.95□□□□□ -0.02
UBE3B-212ENST00000540230 E2F1Q01094 437 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms