RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 KIAA1671Q9BY89 1806 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 H0Y626 953 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 CD3EAPO15446 510 aaKnown RBP10.72□□□□□ -0.69
CLIP1-210ENST00000538120 H2AFYO75367 372 aaKnown RBP10.72□□□□□ -0.69
CLIP1-210ENST00000538120 HSPA4LO95757 839 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 UQCRBP14927 111 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 VCLP18206 1134 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 MAGEA8P43361 318 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 COPAP53621 1224 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 NSUN2Q08J23 767 aaKnown RBP eCLIP10.72□□□□□ -0.69
CLIP1-210ENST00000538120 MED21Q13503 144 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 NCEH1Q6PIU2 408 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 FRMD7Q6ZUT3 714 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 DEFB107AQ8IZN7 70 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 LSMEM2Q8N112 164 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 MAPK15Q8TD08 544 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 NCSTNQ92542 709 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 EZH1Q92800 747 aaPredicted RBP10.72□□□□□ -0.69
CLIP1-210ENST00000538120 TMA16Q96EY4 203 aaKnown RBP10.72□□□□□ -0.69
CLIP1-210ENST00000538120 CDKN2AIPNLQ96HQ2 116 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 UBXN10Q96LJ8 280 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 PRR14Q9BWN1 585 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 MAN1C1Q9NR34 630 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 NLE1Q9NVX2 485 aaPredicted RBP10.72□□□□□ -0.69
CLIP1-210ENST00000538120 CDH22Q9UJ99 828 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 PCDHGB4Q9UN71 923 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 APOBEC2Q9Y235 224 aaKnown RBP10.72□□□□□ -0.69
CLIP1-210ENST00000538120 PCDHGC4Q9Y5F7 938 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 PCDHGB5Q9Y5G0 923 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 RAI2Q9Y5P3 530 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 TXNDC9O14530 226 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 CCNT2O60583 730 aaKnown RBP10.72□□□□□ -0.69
CLIP1-210ENST00000538120 PGM3O95394 542 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 CXCL14O95715 111 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 GLP2RO95838 553 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 ITGAXP20702 1163 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 CES1P23141 567 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 MPSTP25325 297 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 CSKP41240 450 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 NAGLUP54802 743 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 SLC12A2P55011 1212 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 TRAF2Q12933 501 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 CSHL1Q14406 222 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 PTPRRQ15256 657 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 TRIP10Q15642 601 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 TBCCQ15814 346 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 TECRLQ5HYJ1 363 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 PGM2L1Q6PCE3 622 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 AAGABQ6PD74 315 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 EPGNQ6UW88 154 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 RAVER1Q8IY67 606 aaKnown RBP10.72□□□□□ -0.69
CLIP1-210ENST00000538120 HJURPQ8NCD3 748 aaPredicted RBP10.72□□□□□ -0.69
CLIP1-210ENST00000538120 MRPL57Q9BQC6 102 aaKnown RBP10.72□□□□□ -0.69
CLIP1-210ENST00000538120 CENPKQ9BS16 269 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 KLHL4Q9C0H6 718 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 MRPL46Q9H2W6 279 aaKnown RBP10.72□□□□□ -0.69
CLIP1-210ENST00000538120 ZDHHC7Q9NXF8 308 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 POMPQ9Y244 141 aa10.72□□□□□ -0.69
CLIP1-210ENST00000538120 MT-CO1P00395 513 aa10.71□□□□□ -0.69
CLIP1-210ENST00000538120 GJA1P17302 382 aa10.71□□□□□ -0.69
CLIP1-210ENST00000538120 NCF2P19878 526 aaPredicted RBP10.71□□□□□ -0.69
CLIP1-210ENST00000538120 CA8P35219 290 aa10.71□□□□□ -0.69
CLIP1-210ENST00000538120 PRKAA2P54646 552 aa10.71□□□□□ -0.69
CLIP1-210ENST00000538120 SLC7A9P82251 487 aa10.71□□□□□ -0.69
CLIP1-210ENST00000538120 GUCA2AQ02747 115 aa10.71□□□□□ -0.69
CLIP1-210ENST00000538120 CREMQ03060 361 aa10.71□□□□□ -0.69
CLIP1-210ENST00000538120 ARL13AQ5H913 290 aaPredicted RBP10.71□□□□□ -0.69
CLIP1-210ENST00000538120 HTR3DQ70Z44 454 aa10.71□□□□□ -0.69
CLIP1-210ENST00000538120 NECAB2Q7Z6G3 386 aa10.71□□□□□ -0.69
CLIP1-210ENST00000538120 ADGRG6Q86SQ4 1221 aa10.71□□□□□ -0.69
CLIP1-210ENST00000538120 ST13P4Q8IZP2 240 aaPredicted RBP10.71□□□□□ -0.69
CLIP1-210ENST00000538120 APCDD1Q8J025 514 aa10.71□□□□□ -0.69
CLIP1-210ENST00000538120 FIBCD1Q8N539 461 aa10.71□□□□□ -0.69
CLIP1-210ENST00000538120 TDRD5Q8NAT2 981 aaKnown RBP10.71□□□□□ -0.69
CLIP1-210ENST00000538120 TXNDC5Q8NBS9 432 aaKnown RBP10.71□□□□□ -0.69
CLIP1-210ENST00000538120 OR4L1Q8NH43 312 aa10.71□□□□□ -0.69
CLIP1-210ENST00000538120 B4GALNT2Q8NHY0 566 aa10.71□□□□□ -0.69
CLIP1-210ENST00000538120 GABPB2Q8TAK5 448 aaPredicted RBP10.71□□□□□ -0.69
CLIP1-210ENST00000538120 CLP1Q92989 425 aaKnown RBP10.71□□□□□ -0.69
CLIP1-210ENST00000538120 SGF29Q96ES7 293 aa10.71□□□□□ -0.69
CLIP1-210ENST00000538120 COG4Q9H9E3 785 aa10.71□□□□□ -0.69
CLIP1-210ENST00000538120 VPS51Q9UID3 782 aa10.71□□□□□ -0.69
CLIP1-210ENST00000538120 CLEC4EQ9ULY5 219 aa10.71□□□□□ -0.69
CLIP1-210ENST00000538120 CRYL1Q9Y2S2 319 aa10.71□□□□□ -0.69
CLIP1-210ENST00000538120 NEMP2A6NFY4 417 aa10.7□□□□□ -0.7
CLIP1-210ENST00000538120 H3BNX3 289 aa10.7□□□□□ -0.7
CLIP1-210ENST00000538120 DCXO43602 365 aa10.7□□□□□ -0.7
CLIP1-210ENST00000538120 ZBTB14O43829 449 aa10.7□□□□□ -0.7
CLIP1-210ENST00000538120 CCDC166P0CW27 439 aa10.7□□□□□ -0.7
CLIP1-210ENST00000538120 KCNA5P22460 613 aa10.7□□□□□ -0.7
CLIP1-210ENST00000538120 FDXRP22570 491 aa10.7□□□□□ -0.7
CLIP1-210ENST00000538120 PFKPQ01813 784 aa10.7□□□□□ -0.7
CLIP1-210ENST00000538120 TAF1AQ15573 450 aaPredicted RBP10.7□□□□□ -0.7
CLIP1-210ENST00000538120 MMEL1Q495T6 779 aa10.7□□□□□ -0.7
CLIP1-210ENST00000538120 SLC9B1Q4ZJI4 515 aa10.7□□□□□ -0.7
CLIP1-210ENST00000538120 INO80DQ53TQ3 878 aaPredicted RBP10.7□□□□□ -0.7
CLIP1-210ENST00000538120 BLOC1S3Q6QNY0 202 aa10.7□□□□□ -0.7
CLIP1-210ENST00000538120 ARHGAP22Q7Z5H3 698 aa10.7□□□□□ -0.7
CLIP1-210ENST00000538120 PIM3Q86V86 326 aa10.7□□□□□ -0.7
CLIP1-210ENST00000538120 BBS7Q8IWZ6 715 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms