RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 MARCH4Q9P2E8 410 aaPredicted RBP8.21□□□□□ -1.09
ABCA4-207ENST00000536513 TMCC3Q9ULS5 477 aa8.21□□□□□ -1.09
ABCA4-207ENST00000536513 ARHGAP26Q9UNA1 814 aa8.21□□□□□ -1.09
ABCA4-207ENST00000536513 YBX2Q9Y2T7 364 aaKnown RBP8.21□□□□□ -1.09
ABCA4-207ENST00000536513 CACNA1EQ15878 2313 aa8.21□□□□□ -1.09
ABCA4-207ENST00000536513 OR1I1O60431 355 aa8.21□□□□□ -1.09
ABCA4-207ENST00000536513 CLDN7O95471 211 aa8.21□□□□□ -1.09
ABCA4-207ENST00000536513 NELFEP18615 380 aaKnown RBP8.21□□□□□ -1.09
ABCA4-207ENST00000536513 PTPN7P35236 360 aa8.21□□□□□ -1.09
ABCA4-207ENST00000536513 PSMD7P51665 324 aa8.21□□□□□ -1.09
ABCA4-207ENST00000536513 AQP5P55064 265 aa8.21□□□□□ -1.09
ABCA4-207ENST00000536513 CDH4P55283 916 aa8.21□□□□□ -1.09
ABCA4-207ENST00000536513 TBL3Q12788 808 aaKnown RBP8.21□□□□□ -1.09
ABCA4-207ENST00000536513 ARHGEF7Q14155 803 aa8.21□□□□□ -1.09
ABCA4-207ENST00000536513 PDK3Q15120 406 aa8.21□□□□□ -1.09
ABCA4-207ENST00000536513 PTPRNQ16849 979 aa8.21□□□□□ -1.09
ABCA4-207ENST00000536513 PCID2Q5JVF3 399 aa8.21□□□□□ -1.09
ABCA4-207ENST00000536513 LYSMD3Q7Z3D4 306 aa8.21□□□□□ -1.09
ABCA4-207ENST00000536513 RD3Q7Z3Z2 195 aa8.21□□□□□ -1.09
ABCA4-207ENST00000536513 PATL1Q86TB9 770 aaKnown RBP8.21□□□□□ -1.09
ABCA4-207ENST00000536513 RNF148Q8N7C7 305 aa8.21□□□□□ -1.09
ABCA4-207ENST00000536513 DCAKDQ8WVC6 231 aa8.21□□□□□ -1.09
ABCA4-207ENST00000536513 SLC44A1Q8WWI5 657 aa8.21□□□□□ -1.09
ABCA4-207ENST00000536513 E2F7Q96AV8 911 aa8.21□□□□□ -1.09
ABCA4-207ENST00000536513 SLC39A13Q96H72 371 aa8.21□□□□□ -1.09
ABCA4-207ENST00000536513 HAUS8Q9BT25 410 aa8.21□□□□□ -1.09
ABCA4-207ENST00000536513 CACNA2D2Q9NY47 1150 aa8.21□□□□□ -1.09
ABCA4-207ENST00000536513 WARS2Q9UGM6 360 aaKnown RBP8.21□□□□□ -1.09
ABCA4-207ENST00000536513 SH3GLB1Q9Y371 365 aa8.21□□□□□ -1.09
ABCA4-207ENST00000536513 HBS1LQ9Y450 684 aaKnown RBP8.21□□□□□ -1.09
ABCA4-207ENST00000536513 REV3LO60673 3130 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 A0A1W2PQ67 120 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 PABPN1LA6NDY0 278 aaKnown RBP8.21□□□□□ -1.1
ABCA4-207ENST00000536513 SUPT7LO94864 414 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 ABLIM3O94929 683 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 OR6B1O95007 311 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 PCDH8O95206 1070 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 AHSGP02765 367 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 FOSL1P15407 271 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 STMN1P16949 149 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 NUBP1P53384 320 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 MAPK10P53779 464 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 SLC25A3Q00325 362 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 RAD51Q06609 339 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 HSPA14Q0VDF9 509 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 LPCAT2Q7L5N7 544 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 TMPRSS6Q8IU80 811 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 SFTPA1Q8IWL2 248 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 TCEAL8Q8IYN2 117 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 C2orf73Q8N5S3 287 aaPredicted RBP8.21□□□□□ -1.1
ABCA4-207ENST00000536513 CHST14Q8NCH0 376 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 OR6Y1Q8NGX8 325 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 RFWD2Q8NHY2 731 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 GIPC3Q8TF64 312 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 NXNL1Q96CM4 212 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 ABHD8Q96I13 439 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 KLHL32Q96NJ5 620 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 PLEKHG4BQ96PX9 1271 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 SEZ6LQ9BYH1 1024 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 ASB8Q9H765 288 aa8.21□□□□□ -1.1
ABCA4-207ENST00000536513 POLR3BQ9NW08 1133 aaPredicted RBP8.21□□□□□ -1.1
ABCA4-207ENST00000536513 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.21□□□□□ -1.1
ABCA4-207ENST00000536513 GOT2P00505 430 aaKnown RBP8.2□□□□□ -1.1
ABCA4-207ENST00000536513 MC4RP32245 332 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 SCAPQ12770 1279 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 SEMA3BQ13214 749 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 STX3Q13277 289 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 PKN3Q6P5Z2 889 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 RFLNAQ6ZTI6 216 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 ZNF554Q86TJ5 538 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 TSPAN33Q86UF1 283 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 C10orf107Q8IVU9 208 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 KIAA2013Q8IYS2 634 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 DDHD1Q8NEL9 900 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 USP13Q92995 863 aaPredicted RBP8.2□□□□□ -1.1
ABCA4-207ENST00000536513 SCAMP4Q969E2 229 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 GFM2Q969S9 779 aaKnown RBP8.2□□□□□ -1.1
ABCA4-207ENST00000536513 VAT1Q99536 393 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 TXLNGYQ9BZA5 131 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 FOXP3Q9BZS1 431 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 SLC25A51Q9H1U9 297 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 SAR1AQ9NR31 198 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 ADA2Q9NZK5 511 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 STX18Q9P2W9 335 aaKnown RBP8.2□□□□□ -1.1
ABCA4-207ENST00000536513 SLC25A13Q9UJS0 675 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 SLC8A2Q9UPR5 921 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 COQ6Q9Y2Z9 468 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 RAD54BQ9Y620 910 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 CCDC162PA2VCL2 907 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 KRT87PA6NCN2 255 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 OR2AG2A6NM03 316 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 TTC34A8MYJ7 566 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 C9JVG2 144 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 E9PBE3 544 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 KLHL41O60662 606 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 EDF1O60869 148 aaKnown RBP8.2□□□□□ -1.1
ABCA4-207ENST00000536513 ZMPSTE24O75844 475 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 EPHX1P07099 455 aa8.2□□□□□ -1.1
ABCA4-207ENST00000536513 ENO3P13929 434 aaPredicted RBP8.2□□□□□ -1.1
ABCA4-207ENST00000536513 GCAP28676 217 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms