RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 MMP2P08253 660 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 ITGA2BP08514 1039 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 JMJD7P0C870 316 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 COMTP21964 271 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 ALDH4A1P30038 563 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 CCKBRP32239 447 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 ACTR1BP42025 376 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 MAGEA1P43355 309 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 MAZP56270 477 aaKnown RBP15.36■□□□□ 0.05
CPSF1-211ENST00000533492 TMPRSS3P57727 454 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 ACTR1AP61163 376 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 SKOR1P84550 965 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 ZBTB17Q13105 803 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 TBX2Q13207 712 aaPredicted RBP15.36■□□□□ 0.05
CPSF1-211ENST00000533492 QPCTQ16769 361 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 NPNTQ6UXI9 565 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 BZW1Q7L1Q6 419 aaKnown RBP15.36■□□□□ 0.05
CPSF1-211ENST00000533492 NT5DC3Q86UY8 548 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 JAMLQ86YT9 394 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 GALNT13Q8IUC8 556 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 CNTD1Q8N815 330 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 PTCD2Q8WV60 388 aaKnown RBP15.36■□□□□ 0.05
CPSF1-211ENST00000533492 AGAP3Q96P47 875 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 BBC3Q96PG8 261 aaPredicted RBP15.36■□□□□ 0.05
CPSF1-211ENST00000533492 LYSMD1Q96S90 227 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 CEP41Q9BYV8 373 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 BRD8Q9H0E9 1235 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 FAM83DQ9H4H8 585 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 WDR70Q9NW82 654 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.36■□□□□ 0.05
CPSF1-211ENST00000533492 IGSF10Q6WRI0 2623 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 ATRXP46100 2492 aa15.36■□□□□ 0.05
CPSF1-211ENST00000533492 TEX51A0A1B0GUA7 166 aa15.35■□□□□ 0.05
CPSF1-211ENST00000533492 RGSL1A5PLK6 1076 aa15.35■□□□□ 0.05
CPSF1-211ENST00000533492 UGT1A5P35504 534 aa15.35■□□□□ 0.05
CPSF1-211ENST00000533492 SPINT3P49223 89 aa15.35■□□□□ 0.05
CPSF1-211ENST00000533492 COL9A2Q14055 689 aaPredicted RBP15.35■□□□□ 0.05
CPSF1-211ENST00000533492 TFDP2Q14188 446 aa15.35■□□□□ 0.05
CPSF1-211ENST00000533492 GALNT3Q14435 633 aa15.35■□□□□ 0.05
CPSF1-211ENST00000533492 TCEAL1Q15170 157 aa15.35■□□□□ 0.05
CPSF1-211ENST00000533492 AMZ1Q400G9 498 aa15.35■□□□□ 0.05
CPSF1-211ENST00000533492 MAP9Q49MG5 647 aa15.35■□□□□ 0.05
CPSF1-211ENST00000533492 PYCR3Q53H96 274 aa15.35■□□□□ 0.05
CPSF1-211ENST00000533492 CCDC70Q6NSX1 233 aa15.35■□□□□ 0.05
CPSF1-211ENST00000533492 MFSD7Q6UXD7 560 aa15.35■□□□□ 0.05
CPSF1-211ENST00000533492 KDELC2Q7Z4H8 507 aa15.35■□□□□ 0.05
CPSF1-211ENST00000533492 PIM3Q86V86 326 aa15.35■□□□□ 0.05
CPSF1-211ENST00000533492 C17orf82Q86X59 251 aaPredicted RBP15.35■□□□□ 0.05
CPSF1-211ENST00000533492 SCARF2Q96GP6 870 aaPredicted RBP15.35■□□□□ 0.05
CPSF1-211ENST00000533492 COX14Q96I36 57 aa15.35■□□□□ 0.05
CPSF1-211ENST00000533492 ZNHIT2Q9UHR6 403 aa15.35■□□□□ 0.05
CPSF1-211ENST00000533492 PLEKHM1Q9Y4G2 1056 aa15.35■□□□□ 0.05
CPSF1-211ENST00000533492 AGRPO00253 132 aa15.34■□□□□ 0.05
CPSF1-211ENST00000533492 B4GAT1O43505 415 aa15.34■□□□□ 0.05
CPSF1-211ENST00000533492 CPNE6O95741 557 aa15.34■□□□□ 0.05
CPSF1-211ENST00000533492 HGFP14210 728 aa15.34■□□□□ 0.05
CPSF1-211ENST00000533492 NR2C2P49116 596 aa15.34■□□□□ 0.05
CPSF1-211ENST00000533492 OR1D5P58170 312 aa15.34■□□□□ 0.05
CPSF1-211ENST00000533492 B4GALNT1Q00973 533 aa15.34■□□□□ 0.05
CPSF1-211ENST00000533492 ZFP36L1Q07352 338 aaKnown RBP15.34■□□□□ 0.05
CPSF1-211ENST00000533492 PCSK7Q16549 785 aa15.34■□□□□ 0.05
CPSF1-211ENST00000533492 PHF19Q5T6S3 580 aa15.34■□□□□ 0.05
CPSF1-211ENST00000533492 ARHGAP40Q5TG30 622 aa15.34■□□□□ 0.05
CPSF1-211ENST00000533492 USP53Q70EK8 1073 aa15.34■□□□□ 0.05
CPSF1-211ENST00000533492 B4GALNT4Q76KP1 1039 aa15.34■□□□□ 0.05
CPSF1-211ENST00000533492 CLEC14AQ86T13 490 aa15.34■□□□□ 0.05
CPSF1-211ENST00000533492 NAGSQ8N159 534 aa15.34■□□□□ 0.05
CPSF1-211ENST00000533492 PATE1Q8WXA2 126 aa15.34■□□□□ 0.05
CPSF1-211ENST00000533492 TMEM159Q96B96 161 aa15.34■□□□□ 0.05
CPSF1-211ENST00000533492 IMP4Q96G21 291 aaKnown RBP15.34■□□□□ 0.05
CPSF1-211ENST00000533492 OLFM3Q96PB7 478 aa15.34■□□□□ 0.05
CPSF1-211ENST00000533492 CMKLR1Q99788 373 aa15.34■□□□□ 0.05
CPSF1-211ENST00000533492 SLC25A51Q9H1U9 297 aa15.34■□□□□ 0.05
CPSF1-211ENST00000533492 ZFYVE1Q9HBF4 777 aa15.34■□□□□ 0.05
CPSF1-211ENST00000533492 CPNE5Q9HCH3 593 aa15.34■□□□□ 0.05
CPSF1-211ENST00000533492 AKAP7Q9P0M2 348 aaPredicted RBP15.34■□□□□ 0.05
CPSF1-211ENST00000533492 PISDQ9UG56 409 aa15.34■□□□□ 0.05
CPSF1-211ENST00000533492 LOXL2Q9Y4K0 774 aa15.34■□□□□ 0.05
CPSF1-211ENST00000533492 ST14Q9Y5Y6 855 aa15.34■□□□□ 0.05
CPSF1-211ENST00000533492 ALG6Q9Y672 507 aa15.34■□□□□ 0.05
CPSF1-211ENST00000533492 PSTPIP1O43586 416 aa15.33■□□□□ 0.04
CPSF1-211ENST00000533492 CST8O60676 142 aa15.33■□□□□ 0.04
CPSF1-211ENST00000533492 ATP1A1P05023 1023 aaKnown RBP15.33■□□□□ 0.04
CPSF1-211ENST00000533492 SLC5A2P31639 672 aa15.33■□□□□ 0.04
CPSF1-211ENST00000533492 GPR3P46089 330 aa15.33■□□□□ 0.04
CPSF1-211ENST00000533492 PPM1FP49593 454 aaPredicted RBP15.33■□□□□ 0.04
CPSF1-211ENST00000533492 CDK18Q07002 472 aa15.33■□□□□ 0.04
CPSF1-211ENST00000533492 LRP8Q14114 963 aa15.33■□□□□ 0.04
CPSF1-211ENST00000533492 LLGL1Q15334 1064 aa15.33■□□□□ 0.04
CPSF1-211ENST00000533492 SPA17Q15506 151 aa15.33■□□□□ 0.04
CPSF1-211ENST00000533492 TEX44Q53QW1 395 aa15.33■□□□□ 0.04
CPSF1-211ENST00000533492 FAM182AQ5T1J6 154 aa15.33■□□□□ 0.04
CPSF1-211ENST00000533492 KAZNQ674X7 775 aa15.33■□□□□ 0.04
CPSF1-211ENST00000533492 SARM1Q6SZW1 724 aa15.33■□□□□ 0.04
CPSF1-211ENST00000533492 LYSMD3Q7Z3D4 306 aa15.33■□□□□ 0.04
CPSF1-211ENST00000533492 TC2NQ8N9U0 490 aa15.33■□□□□ 0.04
CPSF1-211ENST00000533492 RDH14Q9HBH5 336 aa15.33■□□□□ 0.04
CPSF1-211ENST00000533492 LUC7LQ9NQ29 371 aaKnown RBP15.33■□□□□ 0.04
CPSF1-211ENST00000533492 VPS18Q9P253 973 aa15.33■□□□□ 0.04
CPSF1-211ENST00000533492 PCDHGA7Q9Y5G6 932 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms