RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 SNAP91O60641 907 aa15.27■□□□□ 0.04
CACNA1E-208ENST00000533229 KERAO60938 352 aa15.27■□□□□ 0.04
CACNA1E-208ENST00000533229 RNASEH2AO75792 299 aaKnown RBP15.27■□□□□ 0.04
CACNA1E-208ENST00000533229 TUFMP49411 452 aaKnown RBP15.27■□□□□ 0.04
CACNA1E-208ENST00000533229 ECT2LQ008S8 904 aa15.27■□□□□ 0.04
CACNA1E-208ENST00000533229 MAPRE2Q15555 327 aa15.27■□□□□ 0.04
CACNA1E-208ENST00000533229 PTPRNQ16849 979 aa15.27■□□□□ 0.04
CACNA1E-208ENST00000533229 RNF219Q5W0B1 726 aaPredicted RBP15.27■□□□□ 0.04
CACNA1E-208ENST00000533229 KANK2Q63ZY3 851 aa15.27■□□□□ 0.04
CACNA1E-208ENST00000533229 C8orf82Q6P1X6 216 aaPredicted RBP15.27■□□□□ 0.04
CACNA1E-208ENST00000533229 KLHDC10Q6PID8 442 aa15.27■□□□□ 0.04
CACNA1E-208ENST00000533229 AFTPHQ6ULP2 937 aa15.27■□□□□ 0.04
CACNA1E-208ENST00000533229 RETREG3Q86VR2 466 aa15.27■□□□□ 0.04
CACNA1E-208ENST00000533229 SPATA24Q86W54 205 aa15.27■□□□□ 0.04
CACNA1E-208ENST00000533229 ATP6V1E2Q96A05 226 aa15.27■□□□□ 0.04
CACNA1E-208ENST00000533229 LRCH3Q96II8 777 aa15.27■□□□□ 0.04
CACNA1E-208ENST00000533229 LRGUKQ96M69 825 aa15.27■□□□□ 0.04
CACNA1E-208ENST00000533229 MRPL9Q9BYD2 267 aaKnown RBP15.27■□□□□ 0.04
CACNA1E-208ENST00000533229 DERL2Q9GZP9 239 aa15.27■□□□□ 0.04
CACNA1E-208ENST00000533229 TAS2R13Q9NYV9 303 aa15.27■□□□□ 0.04
CACNA1E-208ENST00000533229 GMPR2Q9P2T1 348 aaKnown RBP15.27■□□□□ 0.04
CACNA1E-208ENST00000533229 FKBPLQ9UIM3 349 aa15.27■□□□□ 0.04
CACNA1E-208ENST00000533229 TBC1D30Q9Y2I9 924 aa15.27■□□□□ 0.04
CACNA1E-208ENST00000533229 LAMA2P24043 3122 aaKnown RBP15.27■□□□□ 0.03
CACNA1E-208ENST00000533229 LCHNA4D1U4 455 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 C2orf81A6NN90 581 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 ANKRD66B4E2M5 251 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 C9JVG2 144 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 MRASO14807 208 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 AZIN1O14977 448 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 DNAJA2O60884 412 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 NDUFS3O75489 264 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 ECI2O75521 394 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 PSMA3P25788 255 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 EEF1DP29692 281 aaKnown RBP15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 TRAF2Q12933 501 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 TLR1Q15399 786 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 GEN1Q17RS7 908 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 USP41Q3LFD5 358 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 ADGRF1Q5T601 910 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 IL23RQ5VWK5 629 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 SPDYE1Q8NFV5 336 aaPredicted RBP15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 STAG3L4Q8TBR4 150 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 DLG3Q92796 817 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 FUBP1Q96AE4 644 aaKnown RBP15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 SLC45A3Q96JT2 553 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 SLC25A23Q9BV35 468 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 SYTL2Q9HCH5 934 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 SEMA4BQ9NPR2 832 aaPredicted RBP15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 PDP2Q9P2J9 529 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 CD300AQ9UGN4 299 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 RNF112Q9ULX5 631 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 PCDHGB4Q9UN71 923 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 BTRCQ9Y297 605 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 ARIH1Q9Y4X5 557 aaPredicted RBP15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 PCDHGB5Q9Y5G0 923 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 LAMA3Q16787 3333 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 A0A1B0GVM2 712 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 NCF1BA6NI72 391 aaPredicted RBP15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 NCF1CA8MVU1 366 aaPredicted RBP15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 SUPT3HB4E1H0 165 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 TXNDC9O14530 226 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 SUPT3HO75486 399 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 TSPAN12O95859 305 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 LINC00032P0C843 101 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 BMP1P13497 986 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 NCF1P14598 390 aaPredicted RBP15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 PRDX3P30048 256 aaKnown RBP15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 ALDH7A1P49419 539 aaKnown RBP15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 ACADVLP49748 655 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 CCL23P55773 120 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 YBX1P67809 324 aaKnown RBP15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 CLCQ05315 142 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 PDK3Q15120 406 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 PITRM1Q5JRX3 1037 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 RAB44Q7Z6P3 723 aaPredicted RBP15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 APLFQ8IW19 511 aaPredicted RBP15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 EFHBQ8N7U6 833 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 TMEM102Q8N9M5 508 aaPredicted RBP15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 PDZD8Q8NEN9 1154 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 PLD4Q96BZ4 506 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 BTBD9Q96Q07 612 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 MUC3BQ9H195 1237 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 RETREG1Q9H6L5 497 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 CWH43Q9H720 699 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 SPAG4Q9NPE6 437 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 CREBZFQ9NS37 354 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 MRGBPQ9NV56 204 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 TMEM181Q9P2C4 612 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 SUCOQ9UBS9 1254 aaKnown RBP15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 BCAP29Q9UHQ4 241 aa15.26■□□□□ 0.03
CACNA1E-208ENST00000533229 HOXA2O43364 376 aa15.25■□□□□ 0.03
CACNA1E-208ENST00000533229 NIPSNAP2O75323 286 aa15.25■□□□□ 0.03
CACNA1E-208ENST00000533229 PRAMEF12O95522 483 aa15.25■□□□□ 0.03
CACNA1E-208ENST00000533229 PIM1P11309 404 aaPredicted RBP15.25■□□□□ 0.03
CACNA1E-208ENST00000533229 LPOP22079 712 aaPredicted RBP15.25■□□□□ 0.03
CACNA1E-208ENST00000533229 MZF1P28698 734 aaPredicted RBP15.25■□□□□ 0.03
CACNA1E-208ENST00000533229 MC4RP32245 332 aa15.25■□□□□ 0.03
CACNA1E-208ENST00000533229 AGTR2P50052 363 aa15.25■□□□□ 0.03
CACNA1E-208ENST00000533229 ATP4BP51164 291 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms