RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 C1orf74Q96LT6 269 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 RPRD1AQ96P16 312 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 TAAR9Q96RI9 348 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 LRRC1Q9BTT6 524 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 DDX47Q9H0S4 455 aaKnown RBP11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 MUC3BQ9H195 1237 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 HOMER3Q9NSC5 361 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 RCOR3Q9P2K3 495 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 OR12D3Q9UGF7 316 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 PCDHGA3Q9Y5H0 932 aa11.35□□□□□ -0.59
TRAPPC4-213ENST00000533149 DOPEY1Q5JWR5 2465 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 A1L4Q6 167 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 NEMP1O14524 444 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 APOL1O14791 398 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 DAPK3O43293 454 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 CTIFO43310 598 aaKnown RBP11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 CLDN11O75508 207 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 MT-CO1P00395 513 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 ZFXP17010 805 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 UGT1A3P35503 534 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 GGCXP38435 758 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 DCTP40126 519 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 KCNJ1P48048 391 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 ZNF135P52742 658 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 HK3P52790 923 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 TERF1P54274 439 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 TPI1P60174 286 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 MTA1Q13330 715 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 SLC9A4Q6AI14 798 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 FBXL22Q6P050 247 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 RFX8Q6ZV50 586 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 CACNA2D3Q8IZS8 1091 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 PLD5Q8N7P1 536 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 TTC13Q8NBP0 860 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 ATG4AQ8WYN0 398 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 RAB7BQ96AH8 199 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 CENPTQ96BT3 561 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 HAUS1Q96CS2 278 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 FAM118BQ9BPY3 351 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 EFHD1Q9BUP0 239 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 C1QTNF7Q9BXJ2 289 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 LRRC19Q9H756 370 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 PRDM8Q9NQV8 689 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 SAE1Q9UBE0 346 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 GGT7Q9UJ14 662 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 PNMA8BQ9ULN7 279 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 TBC1D30Q9Y2I9 924 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 HS3ST4Q9Y661 456 aa11.34□□□□□ -0.59
TRAPPC4-213ENST00000533149 EFCAB7A8K855 629 aa11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 K7ERQ8 282 aa11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 RNF103O00237 685 aa11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 HGSO14964 777 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 NKX2-8O15522 239 aa11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 LRIG2O94898 1065 aa11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 PRKCGP05129 697 aa11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 CELA2BP08218 269 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 RHOXF2BP0C7M4 288 aa11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 ERCC2P18074 760 aa11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 GNLYP22749 145 aa11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 PTGIRP43119 386 aa11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 UQCRFS1P47985 274 aa11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 AUHQ13825 339 aaKnown RBP11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 DPYSQ14117 519 aa11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 ARHGEF7Q14155 803 aa11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 GLE1Q53GS7 698 aaKnown RBP11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 ARTNQ5T4W7 220 aa11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 TTC27Q6P3X3 843 aa11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 NPNTQ6UXI9 565 aa11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 DPY19L3Q6ZPD9 716 aa11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 MAMDC2Q7Z304 686 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 SPRED1Q7Z699 444 aa11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 GPR156Q8NFN8 814 aa11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 OR52K2Q8NGK3 314 aa11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 ACTL9Q8TC94 416 aa11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 KIAA1143Q96AT1 154 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 RHOXF2Q9BQY4 288 aa11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 ETNK2Q9NVF9 386 aa11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 AMACRQ9UHK6 382 aa11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 DRG1Q9Y295 367 aaKnown RBP11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 WASF2Q9Y6W5 498 aa11.33□□□□□ -0.6
TRAPPC4-213ENST00000533149 UTP20O75691 2785 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 UQCRHLA0A096LP55 91 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 APOC4-APOC2K7ER74 178 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 RAD51CO43502 376 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 SMAD6O43541 496 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 LIASO43766 372 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 RASGRP1O95267 797 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 CPNE6O95741 557 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 APOC2P02655 101 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 UQCRHP07919 91 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 CCL4P13236 92 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 PECAM1P16284 738 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 EPHB2P29323 1055 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 HTR7P34969 479 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 FNTAP49354 379 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 CDH4P55283 916 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 SLC7A5Q01650 507 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 MC1RQ01726 317 aa11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 OTUD4Q01804 1114 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-213ENST00000533149 NRG1Q02297 640 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms