RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 CDH15P55291 814 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 RAB12Q6IQ22 244 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 ASB15Q8WXK1 588 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 TRIT1Q9H3H1 467 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 HMX1Q9NP08 348 aaPredicted RBP6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 SHPRHQ149N8 1683 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 TEX51A0A1B0GUA7 166 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 E9PAM4 449 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 HSPA12AO43301 675 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 ITM2AO43736 263 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 TIPRLO75663 272 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 RHOBTB3O94955 611 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 RPLP2P05387 115 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 HOXC6P09630 235 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 ZNF35P13682 527 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 ALADP13716 330 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 MSX2P35548 267 aaPredicted RBP6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 BCAT1P54687 386 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 DCDC1P59894 354 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 HERVK_113P63132 956 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 GSTM4Q03013 218 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 ILF3Q12906 894 aaKnown RBP eCLIP6.95□□□□□ -1.35e-9■■■■■ 30.6
TGFBR3-210ENST00000533089 E2F2Q14209 437 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 GPR68Q15743 365 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 ZCCHC23Q6ZST2 131 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 SLC5A11Q8WWX8 675 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 VPS25Q9BRG1 176 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 MIEF1Q9NQG6 463 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 ITM2CQ9NQX7 267 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 GFOD1Q9NXC2 390 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.95□□□□□ -1.31e-7■■■■□ 23.1
TGFBR3-210ENST00000533089 FAM198AQ9UFP1 575 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 NR2E3Q9Y5X4 410 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 A0A087X0T9 212 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 A0A0X1KG70 313 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 A0A1W2PPW3 197 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 GRXCR2A6NFK2 248 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 TMEM88BA6NKF7 163 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 E9PI62 339 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 NKRFO15226 690 aaKnown RBP eCLIP6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 NFKB1P19838 968 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 MAPK1P28482 360 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 CHAF1BQ13112 559 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 GRIK4Q16099 956 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 AADACL4Q5VUY2 407 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 DENND1BQ6P3S1 775 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 CFAP77Q6ZQR2 320 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 TFAP2DQ7Z6R9 452 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 CLNKQ7Z7G1 428 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 MTMR14Q8NCE2 650 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 OR5T3Q8NGG3 340 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 AP3S1Q92572 193 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 EDEM1Q92611 657 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 THAP1Q9NVV9 213 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 IGSF9Q9P2J2 1179 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 KANSL3Q9P2N6 904 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 PCDHB5Q9Y5E4 795 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 KCPQ6ZWJ8 1503 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 CNTNAP5Q8WYK1 1306 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 PHRF1Q9P1Y6 1649 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 LTN1O94822 1766 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 KRBA1A5PL33 1030 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 METTL18O95568 372 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 SPARCP09486 303 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 CCNYL3P0C7X3 344 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 CTSEP14091 401 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 PRKCAP17252 672 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 MMP13P45452 471 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 RPL21P46778 160 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 TKTL1P51854 596 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 VGLL4Q14135 290 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 WSCD2Q2TBF2 565 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 PAN3Q58A45 887 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 SAMD4BQ5PRF9 694 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 ACAD10Q6JQN1 1059 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 RBM43Q6ZSC3 357 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 C16orf59Q7L2K0 433 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 FAM228AQ86W67 206 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 WDR49Q8IV35 697 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 ZNF276Q8N554 614 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 FBXO36Q8NEA4 188 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 NR4A3Q92570 626 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 TCEAL7Q9BRU2 100 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 WDR18Q9BV38 432 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 MIR1-1HGQ9H1L0 117 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 PXMP2Q9NR77 195 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 SPG21Q9NZD8 308 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 ANAPC2Q9UJX6 822 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 SF3B1O75533 1304 aaKnown RBP eCLIP6.95□□□□□ -1.34e-12■■■■■ 275.7
TGFBR3-210ENST00000533089 A6NL46 340 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 MRASO14807 208 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 DHX15O43143 795 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 TRIM3O75382 744 aaPredicted RBP6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 ZNF432O94892 652 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 SGPL1O95470 568 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 ZNF81P51508 661 aa6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 PSMD4P55036 377 aaKnown RBP6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 ARSJQ5FYB0 599 aaPredicted RBP6.95□□□□□ -1.3
TGFBR3-210ENST00000533089 PITRM1Q5JRX3 1037 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms