RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 RNF39Q9H2S5 420 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 RHOJQ9H4E5 214 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 ST6GALNAC4Q9H4F1 302 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 BCL10O95999 233 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 GJA1P17302 382 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 MAT2AP31153 395 aaKnown RBP14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 ISLR2Q6UXK2 745 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 GALNT13Q8IUC8 556 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 OR4K2Q8NGD2 314 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 ITCHQ96J02 903 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 POLMQ9NP87 494 aaPredicted RBP14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 SNX15Q9NRS6 342 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 RASGRP1O95267 797 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 GAD2Q05329 585 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 TOP3AQ13472 1001 aaPredicted RBP14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 C10orf107Q8IVU9 208 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 FNIP1Q8TF40 1166 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 PHF10Q8WUB8 498 aaKnown RBP14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 MAGEH1Q9H213 219 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 ARHGEF3Q9NR81 526 aa14.75□□□□□ -0.05
PCDHA9-202ENST00000532602 A0A1W2PPM1 405 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 PER2O15055 1255 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 VNN1O95497 513 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 MAPKAPK2P49137 400 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 HNMTP50135 292 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 AP1S1P61966 158 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 SLC26A9Q7LBE3 791 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 OFCC1Q8IZS5 231 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 HERVK_113Q902F9 699 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 PAIP2BQ9ULR5 123 aaKnown RBP14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 A0A1W2PRU2 124 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 GMFGO60234 142 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 LYPLA1O75608 230 aaPredicted RBP14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 PKMP14618 531 aaKnown RBP14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 IDO1P14902 403 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 TNFRSF8P28908 595 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 IDH2P48735 452 aaKnown RBP14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 GATMP50440 423 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 GCNT7Q6ZNI0 430 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 C8orf59Q8N0T1 100 aaPredicted RBP14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 KREMEN2Q8NCW0 462 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 METTL21AQ8WXB1 218 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 GGA2Q9UJY4 613 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 ENO4A6NNW6 628 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 CCNYL3P0C7X3 344 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 WARSP23381 471 aaKnown RBP14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 ITPKAP23677 461 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 CYP4F2P78329 520 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 TNK2Q07912 1038 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 LGALS3BPQ08380 585 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 BNIP2Q12982 314 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 PEG10Q86TG7 708 aaKnown RBP14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 DEPDC4Q8N2C3 294 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 CYP2S1Q96SQ9 504 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 SH3GL2Q99962 352 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 SATB2Q9UPW6 733 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 SCN2BO60939 215 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 POP4O95707 220 aaKnown RBP14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 TBX18O95935 607 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 HNRNPH3P31942 346 aaKnown RBP14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 SF1Q15637 639 aaKnown RBP14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 FBXO48Q5FWF7 155 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 PLEKHA7Q6IQ23 1121 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 CKAP2Q8WWK9 683 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 SPAG4Q9NPE6 437 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 PCDHGC4Q9Y5F7 938 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 DUOX1Q9NRD9 1551 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 TTC24A2A3L6 582 aaPredicted RBP14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 ZNF662Q6ZS27 426 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 PLD4Q96BZ4 506 aa14.74□□□□□ -0.05
PCDHA9-202ENST00000532602 ATRNL1Q5VV63 1379 aa14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 IQCF5A8MTL0 148 aa14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 NOMO1Q15155 1222 aa14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 ATXN7L2Q5T6C5 722 aaPredicted RBP14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 AP2M1Q96CW1 435 aa14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 ZFRQ96KR1 1074 aaKnown RBP14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 MBOAT7Q96N66 472 aa14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 FAM83DQ9H4H8 585 aa14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 SRRDQ9UH36 339 aa14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 C3orf18Q9UK00 162 aa14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 LRCH4O75427 683 aa14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 JAM2P57087 298 aa14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 UBAP2LQ14157 1087 aaKnown RBP14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 HNRNPABQ99729 332 aaKnown RBP14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 MINDY3Q9H8M7 445 aa14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 TRPS1Q9UHF7 1281 aa14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 RFXANKO14593 260 aa14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 ENPP3O14638 875 aa14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 GABRB2P47870 512 aa14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 CAP1Q01518 475 aa14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 AUHQ13825 339 aaKnown RBP14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 LPCAT2Q7L5N7 544 aa14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 VPS35Q96QK1 796 aa14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 FNDC11Q9BVV2 318 aa14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 DNAJC11Q9NVH1 559 aa14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 A0A087WXM4 84 aa14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 TCRBV9S1A1TA0A576 114 aa14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 ZBTB22O15209 634 aa14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 PRG2P13727 222 aa14.73□□□□□ -0.05
PCDHA9-202ENST00000532602 CCNA2P20248 432 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms