RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 TRAF1Q13077 416 aa7.32□□□□□ -1.24
CSDE1-213ENST00000530784 PDCD2Q16342 344 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-213ENST00000530784 PLK5Q496M5 336 aa7.32□□□□□ -1.24
CSDE1-213ENST00000530784 Q5PR19 223 aa7.32□□□□□ -1.24
CSDE1-213ENST00000530784 CELF3Q5SZQ8 465 aaKnown RBP7.32□□□□□ -1.24
CSDE1-213ENST00000530784 C10orf62Q5T681 223 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-213ENST00000530784 VWA5B1Q5TIE3 1220 aa7.32□□□□□ -1.24
CSDE1-213ENST00000530784 AAGABQ6PD74 315 aa7.32□□□□□ -1.24
CSDE1-213ENST00000530784 PARM1Q6UWI2 310 aa7.32□□□□□ -1.24
CSDE1-213ENST00000530784 IGFN1Q86VF2 1251 aa7.32□□□□□ -1.24
CSDE1-213ENST00000530784 PTGR2Q8N8N7 351 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-213ENST00000530784 CMASQ8NFW8 434 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-213ENST00000530784 GDPD5Q8WTR4 605 aa7.32□□□□□ -1.24
CSDE1-213ENST00000530784 LYZL4Q96KX0 146 aa7.32□□□□□ -1.24
CSDE1-213ENST00000530784 MARK4Q96L34 752 aa7.32□□□□□ -1.24
CSDE1-213ENST00000530784 TGS1Q96RS0 853 aaKnown RBP7.32□□□□□ -1.24
CSDE1-213ENST00000530784 RAD9AQ99638 391 aa7.32□□□□□ -1.24
CSDE1-213ENST00000530784 CLPBQ9H078 707 aa7.32□□□□□ -1.24
CSDE1-213ENST00000530784 RBM38Q9H0Z9 239 aaKnown RBP7.32□□□□□ -1.24
CSDE1-213ENST00000530784 MTUS1Q9ULD2 1270 aa7.32□□□□□ -1.24
CSDE1-213ENST00000530784 CHD7Q9P2D1 2997 aa7.32□□□□□ -1.24
CSDE1-213ENST00000530784 MUC3AQ02505 3323 aa7.31□□□□□ -1.24
CSDE1-213ENST00000530784 IGKV2D-30A0A075B6S6 120 aa7.31□□□□□ -1.24
CSDE1-213ENST00000530784 ERICH2A1L162 156 aa7.31□□□□□ -1.24
CSDE1-213ENST00000530784 C17orf102A2RUQ5 167 aa7.31□□□□□ -1.24
CSDE1-213ENST00000530784 LINC01553A4QN01 128 aa7.31□□□□□ -1.24
CSDE1-213ENST00000530784 SMAD6O43541 496 aaKnown RBP7.31□□□□□ -1.24
CSDE1-213ENST00000530784 KRT38O76015 456 aa7.31□□□□□ -1.24
CSDE1-213ENST00000530784 IGHDP01880 384 aa7.31□□□□□ -1.24
CSDE1-213ENST00000530784 KLKB1P03952 638 aa7.31□□□□□ -1.24
CSDE1-213ENST00000530784 POLR2MP0CAP2 368 aa7.31□□□□□ -1.24
CSDE1-213ENST00000530784 CCND2P30279 289 aa7.31□□□□□ -1.24
CSDE1-213ENST00000530784 ARRB2P32121 409 aa7.31□□□□□ -1.24
CSDE1-213ENST00000530784 CHKAP35790 457 aa7.31□□□□□ -1.24
CSDE1-213ENST00000530784 THPOP40225 353 aa7.31□□□□□ -1.24
CSDE1-213ENST00000530784 CDKN2AP42771 156 aaKnown RBP7.31□□□□□ -1.24
CSDE1-213ENST00000530784 CYP2J2P51589 502 aa7.31□□□□□ -1.24
CSDE1-213ENST00000530784 SCN5AQ14524 2016 aa7.31□□□□□ -1.24
CSDE1-213ENST00000530784 TCTN1Q2MV58 587 aa7.31□□□□□ -1.24
CSDE1-213ENST00000530784 HSDL1Q3SXM5 330 aa7.31□□□□□ -1.24
CSDE1-213ENST00000530784 SLC16A12Q6ZSM3 486 aa7.31□□□□□ -1.24
CSDE1-213ENST00000530784 STOX1Q6ZVD7 989 aa7.31□□□□□ -1.24
CSDE1-213ENST00000530784 SERINC5Q86VE9 423 aa7.31□□□□□ -1.24
CSDE1-213ENST00000530784 SCN4BQ8IWT1 228 aa7.31□□□□□ -1.24
CSDE1-213ENST00000530784 C2CD4CQ8TF44 421 aa7.31□□□□□ -1.24
CSDE1-213ENST00000530784 TMLHEQ9NVH6 421 aa7.31□□□□□ -1.24
CSDE1-213ENST00000530784 KLQ9UEF7 1012 aa7.31□□□□□ -1.24
CSDE1-213ENST00000530784 MAD2L2Q9UI95 211 aa7.31□□□□□ -1.24
CSDE1-213ENST00000530784 RPS10-NUDT3A0A1W2PQS6 291 aa7.3□□□□□ -1.24
CSDE1-213ENST00000530784 GAGE12JA6NER3 117 aa7.3□□□□□ -1.24
CSDE1-213ENST00000530784 RSPH10B2B2RC85 870 aa7.3□□□□□ -1.24
CSDE1-213ENST00000530784 IFIT3O14879 490 aaKnown RBP7.3□□□□□ -1.24
CSDE1-213ENST00000530784 RSPH10BP0C881 870 aa7.3□□□□□ -1.24
CSDE1-213ENST00000530784 SMIM10L2AP0DMW4 78 aa7.3□□□□□ -1.24
CSDE1-213ENST00000530784 SMIM10L2BP0DMW5 78 aa7.3□□□□□ -1.24
CSDE1-213ENST00000530784 TGFB3P10600 412 aa7.3□□□□□ -1.24
CSDE1-213ENST00000530784 GSTM2P28161 218 aa7.3□□□□□ -1.24
CSDE1-213ENST00000530784 TNFSF8P32971 234 aa7.3□□□□□ -1.24
CSDE1-213ENST00000530784 PGGT1BP53609 377 aa7.3□□□□□ -1.24
CSDE1-213ENST00000530784 FAM171A1Q5VUB5 890 aa7.3□□□□□ -1.24
CSDE1-213ENST00000530784 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.3□□□□□ -1.244e-13■■■■□ 21.6
CSDE1-213ENST00000530784 BHLHA9Q7RTU4 235 aa7.3□□□□□ -1.24
CSDE1-213ENST00000530784 FAM217AQ8IXS0 508 aa7.3□□□□□ -1.24
CSDE1-213ENST00000530784 MYOCDQ8IZQ8 938 aa7.3□□□□□ -1.24
CSDE1-213ENST00000530784 KDM1BQ8NB78 822 aa7.3□□□□□ -1.24
CSDE1-213ENST00000530784 C7orf57Q8NEG2 295 aa7.3□□□□□ -1.24
CSDE1-213ENST00000530784 DBF4BQ8NFT6 615 aa7.3□□□□□ -1.24
CSDE1-213ENST00000530784 OR6Y1Q8NGX8 325 aa7.3□□□□□ -1.24
CSDE1-213ENST00000530784 B4GALNT2Q8NHY0 566 aa7.3□□□□□ -1.24
CSDE1-213ENST00000530784 ATP6V0A1Q93050 837 aa7.3□□□□□ -1.24
CSDE1-213ENST00000530784 C16orf70Q9BSU1 422 aa7.3□□□□□ -1.24
CSDE1-213ENST00000530784 IL25Q9H293 177 aa7.3□□□□□ -1.24
CSDE1-213ENST00000530784 ACTR5Q9H9F9 607 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-213ENST00000530784 PLEKHA2Q9HB19 425 aa7.3□□□□□ -1.24
CSDE1-213ENST00000530784 XIRP2A4UGR9 3374 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 hCG_1642624A0A1W2PR95 340 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 SPTLC2O15270 562 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 FIBPO43427 364 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 STAM2O75886 525 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 HLA-DQA2P01906 255 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 LGALS2P05162 132 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 ACP5P13686 325 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 CDC25AP30304 524 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 AVPR2P30518 371 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 HOXC8P31273 242 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 NEDD9Q14511 834 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 WTAPQ15007 396 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 SMAD1Q15797 465 aaKnown RBP7.29□□□□□ -1.24
CSDE1-213ENST00000530784 C5orf22Q49AR2 442 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 GXYLT1Q4G148 440 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 MYCT1Q8N699 235 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 FSIP1Q8NA03 581 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 EXOC6Q8TAG9 804 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 RUFY2Q8WXA3 655 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 SEPT8Q92599 483 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 RUBCNQ92622 972 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 GOLGA1Q92805 767 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 FAM122AQ96E09 287 aa7.29□□□□□ -1.24
CSDE1-213ENST00000530784 INPP4AQ96PE3 977 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-213ENST00000530784 WDR77Q9BQA1 342 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms