RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 PAK4O96013 591 aaPredicted RBP8.5□□□□□ -1.05
SSBP3-212ENST00000528930 HNRNPA2B1P22626 353 aaKnown RBP8.5□□□□□ -1.05
SSBP3-212ENST00000528930 SLC5A2P31639 672 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 MAN1A1P33908 653 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 SSR1P43307 286 aaKnown RBP8.5□□□□□ -1.05
SSBP3-212ENST00000528930 CHRNA4P43681 627 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 RPS21P63220 83 aaKnown RBP8.5□□□□□ -1.05
SSBP3-212ENST00000528930 DAB2P98082 770 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 NSUN2Q08J23 767 aaKnown RBP eCLIP8.5□□□□□ -1.05
SSBP3-212ENST00000528930 SLC10A7Q0GE19 358 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 OVGP1Q12889 678 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 KLRB1Q12918 225 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 MESDQ14696 234 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 RFTN1Q14699 578 aaPredicted RBP8.5□□□□□ -1.05
SSBP3-212ENST00000528930 MANEAQ5SRI9 462 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 KIAA1161Q6NSJ0 714 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 TMCO3Q6UWJ1 677 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 SRLQ86TD4 932 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 TTC7BQ86TV6 843 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 VASH2Q86V25 355 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 HEATR4Q86WZ0 1026 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 ZSWIM9Q86XI8 627 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 CAMK1DQ8IU85 385 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 GOLGA6L1Q8N7Z2 621 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 PCDH19Q8TAB3 1148 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 HCAR2Q8TDS4 363 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 SKA1Q96BD8 255 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 FAF2Q96CS3 445 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 BMFQ96LC9 184 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 ZNF599Q96NL3 588 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 PSKH2Q96QS6 385 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 KLF6Q99612 283 aaPredicted RBP8.5□□□□□ -1.05
SSBP3-212ENST00000528930 SP110Q9HB58 689 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 FZD3Q9NPG1 666 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 ZNF71Q9NQZ8 489 aaPredicted RBP8.5□□□□□ -1.05
SSBP3-212ENST00000528930 KLHL11Q9NVR0 708 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 LCMT1Q9UIC8 334 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 INTUQ9ULD6 942 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 ITM2BQ9Y287 266 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 HS3ST3A1Q9Y663 406 aa8.5□□□□□ -1.05
SSBP3-212ENST00000528930 CSPG4Q6UVK1 2322 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 DIDO1Q9BTC0 2240 aaKnown RBP8.49□□□□□ -1.05
SSBP3-212ENST00000528930 ANKRD36A6QL64 1941 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 UQCRHLA0A096LP55 91 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 IGLON5A6NGN9 336 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 TRAFD1O14545 582 aaPredicted RBP8.49□□□□□ -1.05
SSBP3-212ENST00000528930 RAD51BO15315 384 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 MAGEC1O60732 1142 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 UQCRHP07919 91 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 KDELR1P24390 212 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 SERPINB6P35237 376 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 GJC1P36383 396 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 ARHGAP25P42331 645 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 MAGEA1P43355 309 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 CLDN2P57739 230 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 KRT81Q14533 505 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 LBRQ14739 615 aaKnown RBP8.49□□□□□ -1.05
SSBP3-212ENST00000528930 GRM3Q14832 879 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 PAFAH1B3Q15102 231 aaKnown RBP8.49□□□□□ -1.05
SSBP3-212ENST00000528930 PDK2Q15119 407 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 UGP2Q16851 508 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 TMEM52BQ4KMG9 183 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 SLC45A4Q5BKX6 768 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 ANKRD20A8PQ5CZ79 823 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 LRRC73Q5JTD7 316 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 TMCO4Q5TGY1 634 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 NCBP2-AS2Q69YL0 99 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 GCNT7Q6ZNI0 430 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 ABI3BPQ7Z7G0 1075 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 RHOT2Q8IXI1 618 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 SLC22A18ASQ8N1D0 253 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 PGBD5Q8N414 524 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 PQLC3Q8N755 202 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 KCTD6Q8NC69 237 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 OR13H1Q8NG92 308 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 OR4C6Q8NH72 309 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 ASB12Q8WXK4 309 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 RAPGEF5Q92565 580 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 ECHDC3Q96DC8 303 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 KLHDC7BQ96G42 594 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 TCTN2Q96GX1 697 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 ZNF641Q96N77 438 aaPredicted RBP8.49□□□□□ -1.05
SSBP3-212ENST00000528930 LENG8Q96PV6 779 aaPredicted RBP8.49□□□□□ -1.05
SSBP3-212ENST00000528930 TUBGCP5Q96RT8 1024 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 MYOCQ99972 504 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 ZNF670Q9BS34 389 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 CINPQ9BW66 212 aaPredicted RBP8.49□□□□□ -1.05
SSBP3-212ENST00000528930 CAAP1Q9H8G2 361 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 GPR27Q9NS67 375 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 PHTF1Q9UMS5 762 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 ENTPD4Q9Y227 616 aa8.49□□□□□ -1.05
SSBP3-212ENST00000528930 CCDC187A0A096LP49 1063 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 LY6G6EA0A0G2JKS1 128 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 KRTAP9-6A0A140TA67 174 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 POM121BA6NF01 834 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 C3orf70A6NLC5 250 aaPredicted RBP8.48□□□□□ -1.05
SSBP3-212ENST00000528930 TMEM110-MUSTN1A8MSY1 372 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 MFSD11O43934 449 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 MMP20O60882 483 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 MSX1P28360 303 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms