RNA–Protein interactions for RNA: ENST00000527821.2

SSH3-205, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 3

Gene SSH3, Length 656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-205ENST00000527821 FGF22Q9HCT0 170 aa16.45■□□□□ 0.22
SSH3-205ENST00000527821 MRPL40Q9NQ50 206 aaKnown RBP16.45■□□□□ 0.22
SSH3-205ENST00000527821 FEZ2Q9UHY8 353 aaPredicted RBP16.45■□□□□ 0.22
SSH3-205ENST00000527821 PKP3Q9Y446 797 aa16.45■□□□□ 0.22
SSH3-205ENST00000527821 SAR1BQ9Y6B6 198 aa16.45■□□□□ 0.22
SSH3-205ENST00000527821 SCN8AQ9UQD0 1980 aa16.45■□□□□ 0.22
SSH3-205ENST00000527821 PRSS38A1L453 326 aa16.44■□□□□ 0.22
SSH3-205ENST00000527821 C2orf81A6NN90 581 aa16.44■□□□□ 0.22
SSH3-205ENST00000527821 FADS2P1A8MWK0 482 aa16.44■□□□□ 0.22
SSH3-205ENST00000527821 TNFRSF10CO14798 259 aa16.44■□□□□ 0.22
SSH3-205ENST00000527821 SCAMP1O15126 338 aa16.44■□□□□ 0.22
SSH3-205ENST00000527821 CBFA2T3O75081 653 aa16.44■□□□□ 0.22
SSH3-205ENST00000527821 ASMTLO95671 621 aa16.44■□□□□ 0.22
SSH3-205ENST00000527821 CRTAMO95727 393 aa16.44■□□□□ 0.22
SSH3-205ENST00000527821 ALPPL2P10696 532 aa16.44■□□□□ 0.22
SSH3-205ENST00000527821 C1orf61Q13536 156 aa16.44■□□□□ 0.22
SSH3-205ENST00000527821 SEMA5AQ13591 1074 aa16.44■□□□□ 0.22
SSH3-205ENST00000527821 TAF1AQ15573 450 aaPredicted RBP16.44■□□□□ 0.22
SSH3-205ENST00000527821 TRIP6Q15654 476 aaKnown RBP16.44■□□□□ 0.22
SSH3-205ENST00000527821 TTC27Q6P3X3 843 aa16.44■□□□□ 0.22
SSH3-205ENST00000527821 DOK6Q6PKX4 331 aa16.44■□□□□ 0.22
SSH3-205ENST00000527821 LINC00523Q86TU6 105 aa16.44■□□□□ 0.22
SSH3-205ENST00000527821 TRIM74Q86UV6 250 aa16.44■□□□□ 0.22
SSH3-205ENST00000527821 BRSK1Q8TDC3 778 aa16.44■□□□□ 0.22
SSH3-205ENST00000527821 CAPZA3Q96KX2 299 aa16.44■□□□□ 0.22
SSH3-205ENST00000527821 ZSCAN5AQ9BUG6 496 aa16.44■□□□□ 0.22
SSH3-205ENST00000527821 LRRC61Q9BV99 259 aa16.44■□□□□ 0.22
SSH3-205ENST00000527821 SUDS3Q9H7L9 328 aaPredicted RBP16.44■□□□□ 0.22
SSH3-205ENST00000527821 CYP4F12Q9HCS2 524 aa16.44■□□□□ 0.22
SSH3-205ENST00000527821 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.44■□□□□ 0.22
SSH3-205ENST00000527821 IL17CQ9P0M4 197 aa16.44■□□□□ 0.22
SSH3-205ENST00000527821 NFKBIL1Q9UBC1 381 aaPredicted RBP16.44■□□□□ 0.22
SSH3-205ENST00000527821 FTSJ1Q9UET6 329 aa16.44■□□□□ 0.22
SSH3-205ENST00000527821 ARL5AQ9Y689 179 aa16.44■□□□□ 0.22
SSH3-205ENST00000527821 LRP4O75096 1905 aa16.44■□□□□ 0.22
SSH3-205ENST00000527821 SPAARA0A1B0GVQ0 90 aa16.43■□□□□ 0.22
SSH3-205ENST00000527821 STX7O15400 261 aaKnown RBP16.43■□□□□ 0.22
SSH3-205ENST00000527821 PHF2O75151 1096 aa16.43■□□□□ 0.22
SSH3-205ENST00000527821 LDOC1O95751 146 aaPredicted RBP16.43■□□□□ 0.22
SSH3-205ENST00000527821 APRTP07741 180 aa16.43■□□□□ 0.22
SSH3-205ENST00000527821 TPH1P17752 444 aa16.43■□□□□ 0.22
SSH3-205ENST00000527821 LPOP22079 712 aaPredicted RBP16.43■□□□□ 0.22
SSH3-205ENST00000527821 COILP38432 576 aaPredicted RBP16.43■□□□□ 0.22
SSH3-205ENST00000527821 SPAM1P38567 509 aa16.43■□□□□ 0.22
SSH3-205ENST00000527821 BASP1P80723 227 aaKnown RBP16.43■□□□□ 0.22
SSH3-205ENST00000527821 SIM1P81133 766 aaPredicted RBP16.43■□□□□ 0.22
SSH3-205ENST00000527821 TCEA2Q15560 299 aa16.43■□□□□ 0.22
SSH3-205ENST00000527821 TRIP13Q15645 432 aaPredicted RBP16.43■□□□□ 0.22
SSH3-205ENST00000527821 CYP1B1Q16678 543 aa16.43■□□□□ 0.22
SSH3-205ENST00000527821 ZDHHC20Q5W0Z9 365 aa16.43■□□□□ 0.22
SSH3-205ENST00000527821 KCTD16Q68DU8 428 aa16.43■□□□□ 0.22
SSH3-205ENST00000527821 CCDC137Q6PK04 289 aaKnown RBP16.43■□□□□ 0.22
SSH3-205ENST00000527821 PPP1R21Q6ZMI0 780 aa16.43■□□□□ 0.22
SSH3-205ENST00000527821 TRAM1L1Q8N609 369 aa16.43■□□□□ 0.22
SSH3-205ENST00000527821 DNAAF3Q8N9W5 541 aa16.43■□□□□ 0.22
SSH3-205ENST00000527821 BAHD1Q8TBE0 780 aaPredicted RBP16.43■□□□□ 0.22
SSH3-205ENST00000527821 TBATAQ96M53 351 aa16.43■□□□□ 0.22
SSH3-205ENST00000527821 PLEKHG4BQ96PX9 1271 aa16.43■□□□□ 0.22
SSH3-205ENST00000527821 FRMD8Q9BZ67 464 aaPredicted RBP16.43■□□□□ 0.22
SSH3-205ENST00000527821 PIH1D1Q9NWS0 290 aaKnown RBP16.43■□□□□ 0.22
SSH3-205ENST00000527821 DOLKQ9UPQ8 538 aa16.43■□□□□ 0.22
SSH3-205ENST00000527821 TMEM98Q9Y2Y6 226 aa16.43■□□□□ 0.22
SSH3-205ENST00000527821 CSNK1G3Q9Y6M4 447 aa16.43■□□□□ 0.22
SSH3-205ENST00000527821 DGKBQ9Y6T7 804 aa16.43■□□□□ 0.22
SSH3-205ENST00000527821 SPTBN4Q9H254 2564 aa16.42■□□□□ 0.22
SSH3-205ENST00000527821 DCHS1Q96JQ0 3298 aa16.42■□□□□ 0.22
SSH3-205ENST00000527821 TRIM38O00635 465 aa16.42■□□□□ 0.22
SSH3-205ENST00000527821 PPFIA2O75334 1257 aa16.42■□□□□ 0.22
SSH3-205ENST00000527821 GAS8O95995 478 aa16.42■□□□□ 0.22
SSH3-205ENST00000527821 KRT14P02533 472 aa16.42■□□□□ 0.22
SSH3-205ENST00000527821 CEACAM5P06731 702 aa16.42■□□□□ 0.22
SSH3-205ENST00000527821 CASQ1P31415 396 aa16.42■□□□□ 0.22
SSH3-205ENST00000527821 POLD2P49005 469 aa16.42■□□□□ 0.22
SSH3-205ENST00000527821 VPS41P49754 854 aa16.42■□□□□ 0.22
SSH3-205ENST00000527821 PDE1BQ01064 536 aa16.42■□□□□ 0.22
SSH3-205ENST00000527821 PTPRCAPQ14761 206 aa16.42■□□□□ 0.22
SSH3-205ENST00000527821 ELOCQ15369 112 aa16.42■□□□□ 0.22
SSH3-205ENST00000527821 KCTD19Q17RG1 926 aaPredicted RBP16.42■□□□□ 0.22
SSH3-205ENST00000527821 DEFB133Q30KQ1 61 aa16.42■□□□□ 0.22
SSH3-205ENST00000527821 PDPK2PQ6A1A2 396 aa16.42■□□□□ 0.22
SSH3-205ENST00000527821 FSTL5Q8N475 847 aaPredicted RBP16.42■□□□□ 0.22
SSH3-205ENST00000527821 OR52K1Q8NGK4 314 aa16.42■□□□□ 0.22
SSH3-205ENST00000527821 OR4C6Q8NH72 309 aa16.42■□□□□ 0.22
SSH3-205ENST00000527821 COX14Q96I36 57 aa16.42■□□□□ 0.22
SSH3-205ENST00000527821 CNDP2Q96KP4 475 aaKnown RBP16.42■□□□□ 0.22
SSH3-205ENST00000527821 DUSP23Q9BVJ7 150 aa16.42■□□□□ 0.22
SSH3-205ENST00000527821 CLPBQ9H078 707 aa16.42■□□□□ 0.22
SSH3-205ENST00000527821 CARS2Q9HA77 564 aaKnown RBP16.42■□□□□ 0.22
SSH3-205ENST00000527821 NLGN3Q9NZ94 848 aa16.42■□□□□ 0.22
SSH3-205ENST00000527821 CNOT6Q9ULM6 557 aaKnown RBP16.42■□□□□ 0.22
SSH3-205ENST00000527821 SLC17A4Q9Y2C5 497 aa16.42■□□□□ 0.22
SSH3-205ENST00000527821 COL5A1P20908 1838 aaPredicted RBP16.41■□□□□ 0.22
SSH3-205ENST00000527821 TNFSF14O43557 240 aa16.41■□□□□ 0.22
SSH3-205ENST00000527821 SIGLEC6O43699 453 aa16.41■□□□□ 0.22
SSH3-205ENST00000527821 SUN1O94901 812 aa16.41■□□□□ 0.22
SSH3-205ENST00000527821 SLC25A14O95258 325 aaPredicted RBP16.41■□□□□ 0.22
SSH3-205ENST00000527821 ANXA6P08133 673 aa16.41■□□□□ 0.22
SSH3-205ENST00000527821 GIMD1P0DJR0 217 aa16.41■□□□□ 0.22
SSH3-205ENST00000527821 PAFAH1B1P43034 410 aa16.41■□□□□ 0.22
SSH3-205ENST00000527821 GNPDA1P46926 289 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms