RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 PLK4O00444 970 aa18.73■□□□□ 0.59
SMPD1-203ENST00000527275 PLIN3O60664 434 aa18.73■□□□□ 0.59
SMPD1-203ENST00000527275 PAPSS2O95340 614 aaPredicted RBP18.73■□□□□ 0.59
SMPD1-203ENST00000527275 TIMP2P16035 220 aa18.73■□□□□ 0.59
SMPD1-203ENST00000527275 COL9A1P20849 921 aa18.73■□□□□ 0.59
SMPD1-203ENST00000527275 COPAP53621 1224 aa18.73■□□□□ 0.59
SMPD1-203ENST00000527275 ATG16L1Q676U5 607 aa18.73■□□□□ 0.59
SMPD1-203ENST00000527275 USP45Q70EL2 814 aa18.73■□□□□ 0.59
SMPD1-203ENST00000527275 ACVR1CQ8NER5 493 aa18.73■□□□□ 0.59
SMPD1-203ENST00000527275 HCAR2Q8TDS4 363 aa18.73■□□□□ 0.59
SMPD1-203ENST00000527275 ARRDC3Q96B67 414 aa18.73■□□□□ 0.59
SMPD1-203ENST00000527275 EID2BQ96D98 161 aa18.73■□□□□ 0.59
SMPD1-203ENST00000527275 MCCC1Q96RQ3 725 aaPredicted RBP18.73■□□□□ 0.59
SMPD1-203ENST00000527275 GPR22Q99680 433 aa18.73■□□□□ 0.59
SMPD1-203ENST00000527275 LMAN1LQ9HAT1 526 aa18.73■□□□□ 0.59
SMPD1-203ENST00000527275 LTB4R2Q9NPC1 389 aa18.73■□□□□ 0.59
SMPD1-203ENST00000527275 GGT7Q9UJ14 662 aa18.73■□□□□ 0.59
SMPD1-203ENST00000527275 SLC39A10Q9ULF5 831 aa18.73■□□□□ 0.59
SMPD1-203ENST00000527275 A0A096LPK6 155 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 C1QTNF3-AMACRE9PGA6 284 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 CRTAMO95727 393 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 ITGB7P26010 798 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 MPP1Q00013 466 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 FZD5Q13467 585 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 TAF1AQ15573 450 aaPredicted RBP18.72■□□□□ 0.59
SMPD1-203ENST00000527275 CHI3L2Q15782 390 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 NEPROQ6NW34 567 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 NLRP9Q7RTR0 991 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 LYSMD3Q7Z3D4 306 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 TSPAN33Q86UF1 283 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 OR2T3Q8NH03 318 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 RMDN2Q96LZ7 410 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 FAM167BQ9BTA0 163 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 CD248Q9HCU0 757 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 HACD3Q9P035 362 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 TMEM216Q9P0N5 145 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 ZNF711Q9Y462 761 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 C1orf232A0A0U1RR37 186 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 FAM170BA6NMN3 283 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 UPK3BL1B0FP48 263 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 UPK3BL2E5RIL1 263 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 C2P06681 752 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 TROVE2P10155 538 aaKnown RBP eCLIP18.72■□□□□ 0.59
SMPD1-203ENST00000527275 GMPRP36959 345 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 SLC1A2P43004 574 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 TMPRSS15P98073 1019 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 OVGP1Q12889 678 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 CST6Q15828 149 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 CDKN3Q16667 212 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 SPRED3Q2MJR0 410 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 TMEM92Q6UXU6 159 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 C2CD4AQ8NCU7 369 aaPredicted RBP18.72■□□□□ 0.59
SMPD1-203ENST00000527275 OR13J1Q8NGT2 312 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 PPP1R16AQ96I34 528 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 LYSMD1Q96S90 227 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 NPHS2Q9NP85 383 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 PCDH12Q9NPG4 1184 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 MMP17Q9ULZ9 603 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 USH1CQ9Y6N9 552 aa18.72■□□□□ 0.59
SMPD1-203ENST00000527275 C2orf81A6NN90 581 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 CCL22O00626 93 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 RNASEH1O60930 286 aaKnown RBP18.71■□□□□ 0.59
SMPD1-203ENST00000527275 GSTA1P08263 222 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 HSF5Q4G112 596 aaPredicted RBP18.71■□□□□ 0.59
SMPD1-203ENST00000527275 FASTKD1Q53R41 847 aaKnown RBP18.71■□□□□ 0.59
SMPD1-203ENST00000527275 EOGTQ5NDL2 527 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 FAM46CQ5VWP2 391 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 ZNF470Q6ECI4 717 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 FBXL19Q6PCT2 694 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 TMPRSS6Q8IU80 811 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 OR13C4Q8NGS5 318 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 RAB3IL1Q8TBN0 382 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 GPR63Q9BZJ6 419 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 SLC6A17Q9H1V8 727 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 ZFYVE1Q9HBF4 777 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 DYRK4Q9NR20 520 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 ZNF358Q9NW07 568 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 B4GALT6Q9UBX8 382 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 FBXO5Q9UKT4 447 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 MID1O15344 667 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 CLDN7O95471 211 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 PROCP04070 461 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 LHCGRP22888 699 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 XPAP23025 273 aaPredicted RBP18.71■□□□□ 0.59
SMPD1-203ENST00000527275 HMGCLP35914 325 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 BST1Q10588 318 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 USP10Q14694 798 aaKnown RBP18.71■□□□□ 0.59
SMPD1-203ENST00000527275 CRY1Q16526 586 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 DBN1Q16643 649 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 CRTC1Q6UUV9 634 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 PLD6Q8N2A8 252 aaKnown RBP18.71■□□□□ 0.59
SMPD1-203ENST00000527275 TTC30BQ8N4P2 665 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 OR4K2Q8NGD2 314 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 GABPB2Q8TAK5 448 aaPredicted RBP18.71■□□□□ 0.59
SMPD1-203ENST00000527275 CALML6Q8TD86 181 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 C10orf82Q8WW14 230 aa18.71■□□□□ 0.59
SMPD1-203ENST00000527275 DNAJC1Q96KC8 554 aaKnown RBP18.71■□□□□ 0.59
SMPD1-203ENST00000527275 TGDSO95455 350 aa18.7■□□□□ 0.58
SMPD1-203ENST00000527275 SAT1P21673 171 aa18.7■□□□□ 0.58
SMPD1-203ENST00000527275 LPOP22079 712 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms