RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 ADCY4Q8NFM4 1077 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 TRPC4APQ8TEL6 797 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 ATP6V1E2Q96A05 226 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 BIRC8Q96P09 236 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 NACA2Q9H009 215 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 SPAG4Q9NPE6 437 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 SCUBE2Q9NQ36 999 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 MTRRQ9UBK8 725 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 AGO1Q9UL18 857 aaKnown RBP17.5■□□□□ 0.39
USH1C-205ENST00000527020 ARIH1Q9Y4X5 557 aaPredicted RBP17.5■□□□□ 0.39
USH1C-205ENST00000527020 PCDHGC4Q9Y5F7 938 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 OAS3Q9Y6K5 1087 aaKnown RBP17.5■□□□□ 0.39
USH1C-205ENST00000527020 ECI2O75521 394 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 SRP72O76094 671 aaKnown RBP17.5■□□□□ 0.39
USH1C-205ENST00000527020 SEC24AO95486 1093 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 RHOCP08134 193 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 GFAPP14136 432 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 OR1D2P34982 312 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 GRIA2P42262 883 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 C6orf10Q5SRN2 563 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 FAM126BQ8IXS8 530 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 MARVELD2Q8N4S9 558 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 RAET1EQ8TD07 263 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 TOP1MTQ969P6 601 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 PLD4Q96BZ4 506 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 GPR21Q99679 349 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 SYTL2Q9HCH5 934 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 TAS2R13Q9NYV9 303 aa17.5■□□□□ 0.39
USH1C-205ENST00000527020 SUPT3HB4E1H0 165 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 CDC7O00311 574 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 SUPT3HO75486 399 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 EEF1DP29692 281 aaKnown RBP17.49■□□□□ 0.39
USH1C-205ENST00000527020 TSNQ15631 228 aaKnown RBP17.49■□□□□ 0.39
USH1C-205ENST00000527020 FBXO48Q5FWF7 155 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 CXorf57Q6NSI4 855 aaKnown RBP17.49■□□□□ 0.39
USH1C-205ENST00000527020 PSAPL1Q6NUJ1 521 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 CHST9Q7L1S5 443 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 LPCAT1Q8NF37 534 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 STAG3L4Q8TBR4 150 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 PXYLP1Q8TE99 480 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 OVCA2Q8WZ82 227 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 GBP5Q96PP8 586 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 TCF12Q99081 682 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 TSC22D3Q99576 134 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 SLC39A3Q9BRY0 314 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 MRPL9Q9BYD2 267 aaKnown RBP17.49■□□□□ 0.39
USH1C-205ENST00000527020 FAM192AQ9GZU8 254 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 RNF38Q9H0F5 515 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 CWH43Q9H720 699 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 UBAP1Q9NZ09 502 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 GMPR2Q9P2T1 348 aaKnown RBP17.49■□□□□ 0.39
USH1C-205ENST00000527020 CROTQ9UKG9 612 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 RNF112Q9ULX5 631 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 PCDHGB4Q9UN71 923 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 PCDHGB5Q9Y5G0 923 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 RAI2Q9Y5P3 530 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 PLXNA4Q9HCM2 1894 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.49■□□□□ 0.39
USH1C-205ENST00000527020 ENO4A6NNW6 628 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 CBX4O00257 560 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 AP1G1O43747 822 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 TSPAN3O60637 253 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 NDUFS3O75489 264 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 TSPAN12O95859 305 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 ARF5P84085 180 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 CLCQ05315 142 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 TRAP1Q12931 704 aaKnown RBP17.49■□□□□ 0.39
USH1C-205ENST00000527020 ZNF177Q13360 481 aaPredicted RBP17.49■□□□□ 0.39
USH1C-205ENST00000527020 BFSP2Q13515 415 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 PTPRNQ16849 979 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 C16orf59Q7L2K0 433 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 PDZD8Q8NEN9 1154 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 SEPT8Q92599 483 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 FUBP1Q96AE4 644 aaKnown RBP17.49■□□□□ 0.39
USH1C-205ENST00000527020 SLCO4A1Q96BD0 722 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 LRCH3Q96II8 777 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 CEP295NLQ96MC4 621 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 CYP2S1Q96SQ9 504 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 MRPL40Q9NQ50 206 aaKnown RBP17.49■□□□□ 0.39
USH1C-205ENST00000527020 MAP10Q9P2G4 905 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 FKBPLQ9UIM3 349 aa17.49■□□□□ 0.39
USH1C-205ENST00000527020 A0A0J9YYE9 177 aa17.48■□□□□ 0.39
USH1C-205ENST00000527020 A0A0U1RQS6 177 aa17.48■□□□□ 0.39
USH1C-205ENST00000527020 OR1I1O60431 355 aa17.48■□□□□ 0.39
USH1C-205ENST00000527020 FESP07332 822 aa17.48■□□□□ 0.39
USH1C-205ENST00000527020 RPS17P08708 135 aaKnown RBP17.48■□□□□ 0.39
USH1C-205ENST00000527020 CHN2P52757 468 aa17.48■□□□□ 0.39
USH1C-205ENST00000527020 NME5P56597 212 aa17.48■□□□□ 0.39
USH1C-205ENST00000527020 STX1BP61266 288 aa17.48■□□□□ 0.39
USH1C-205ENST00000527020 RHDQ02161 417 aa17.48■□□□□ 0.39
USH1C-205ENST00000527020 RAD51Q06609 339 aa17.48■□□□□ 0.39
USH1C-205ENST00000527020 TRAF2Q12933 501 aa17.48■□□□□ 0.39
USH1C-205ENST00000527020 LCP2Q13094 533 aa17.48■□□□□ 0.39
USH1C-205ENST00000527020 RNF219Q5W0B1 726 aaPredicted RBP17.48■□□□□ 0.39
USH1C-205ENST00000527020 FBXO39Q8N4B4 442 aa17.48■□□□□ 0.39
USH1C-205ENST00000527020 CATSPER1Q8NEC5 780 aa17.48■□□□□ 0.39
USH1C-205ENST00000527020 GPATCH1Q9BRR8 931 aaKnown RBP17.48■□□□□ 0.39
USH1C-205ENST00000527020 EPS15L1Q9UBC2 864 aa17.48■□□□□ 0.39
USH1C-205ENST00000527020 POLG2Q9UHN1 485 aa17.48■□□□□ 0.39
USH1C-205ENST00000527020 RAB26Q9ULW5 256 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms