RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 MAP3K6O95382 1288 aa23.81■■□□□ 1.4
USP47-205ENST00000525257 PCK1P35558 622 aa23.81■■□□□ 1.4
USP47-205ENST00000525257 FASLGP48023 281 aa23.81■■□□□ 1.4
USP47-205ENST00000525257 CDH6P55285 790 aa23.81■■□□□ 1.4
USP47-205ENST00000525257 RAB15P59190 212 aa23.81■■□□□ 1.4
USP47-205ENST00000525257 OR10G6Q8NH81 332 aa23.81■■□□□ 1.4
USP47-205ENST00000525257 AGAP2Q99490 1192 aa23.81■■□□□ 1.4
USP47-205ENST00000525257 DOPEY2Q9Y3R5 2298 aa23.81■■□□□ 1.4
USP47-205ENST00000525257 ZNF891A8MT65 544 aaPredicted RBP23.8■■□□□ 1.4
USP47-205ENST00000525257 A8MU76 341 aa23.8■■□□□ 1.4
USP47-205ENST00000525257 DDX3XO00571 662 aaKnown RBP eCLIP23.8■■□□□ 1.42e-8■■■□□ 16.4
USP47-205ENST00000525257 INPP4BO15327 924 aa23.8■■□□□ 1.4
USP47-205ENST00000525257 DUX1O43812 170 aa23.8■■□□□ 1.4
USP47-205ENST00000525257 EML2O95834 649 aa23.8■■□□□ 1.4
USP47-205ENST00000525257 GZMAP12544 262 aa23.8■■□□□ 1.4
USP47-205ENST00000525257 CCR10P46092 362 aa23.8■■□□□ 1.4
USP47-205ENST00000525257 SKIDA1Q1XH10 827 aa23.8■■□□□ 1.4
USP47-205ENST00000525257 E4F1Q66K89 784 aaPredicted RBP23.8■■□□□ 1.4
USP47-205ENST00000525257 NDUFAF2Q8N183 169 aa23.8■■□□□ 1.4
USP47-205ENST00000525257 SFRP1Q8N474 314 aa23.8■■□□□ 1.4
USP47-205ENST00000525257 AOPEPQ8N6M6 819 aa23.8■■□□□ 1.4
USP47-205ENST00000525257 BMPERQ8N8U9 685 aa23.8■■□□□ 1.4
USP47-205ENST00000525257 CTRCQ99895 268 aa23.8■■□□□ 1.4
USP47-205ENST00000525257 PILRAQ9UKJ1 303 aa23.8■■□□□ 1.4
USP47-205ENST00000525257 ASMTLO95671 621 aa23.79■■□□□ 1.4
USP47-205ENST00000525257 RARAP10276 462 aa23.79■■□□□ 1.4
USP47-205ENST00000525257 SERPINB6P35237 376 aa23.79■■□□□ 1.4
USP47-205ENST00000525257 PTSQ03393 145 aa23.79■■□□□ 1.4
USP47-205ENST00000525257 SRSF1Q07955 248 aaKnown RBP eCLIP23.79■■□□□ 1.4
USP47-205ENST00000525257 ITKQ08881 620 aa23.79■■□□□ 1.4
USP47-205ENST00000525257 LRP8Q14114 963 aa23.79■■□□□ 1.4
USP47-205ENST00000525257 BOLA3Q53S33 107 aa23.79■■□□□ 1.4
USP47-205ENST00000525257 TXNRD3NBQ6F5E7 133 aa23.79■■□□□ 1.4
USP47-205ENST00000525257 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.79■■□□□ 1.4
USP47-205ENST00000525257 RTP4Q96DX8 246 aa23.79■■□□□ 1.4
USP47-205ENST00000525257 EPN3Q9H201 632 aa23.79■■□□□ 1.4
USP47-205ENST00000525257 GPN2Q9H9Y4 310 aaPredicted RBP23.79■■□□□ 1.4
USP47-205ENST00000525257 MRPL47Q9HD33 250 aaKnown RBP23.79■■□□□ 1.4
USP47-205ENST00000525257 PDP2Q9P2J9 529 aa23.79■■□□□ 1.4
USP47-205ENST00000525257 PRKAB1Q9Y478 270 aa23.79■■□□□ 1.4
USP47-205ENST00000525257 PCYT1BQ9Y5K3 369 aaPredicted RBP23.79■■□□□ 1.4
USP47-205ENST00000525257 NKX2-8O15522 239 aa23.78■■□□□ 1.4
USP47-205ENST00000525257 FZD6O60353 706 aa23.78■■□□□ 1.4
USP47-205ENST00000525257 PRKAR1AP10644 381 aa23.78■■□□□ 1.4
USP47-205ENST00000525257 EPHB1P54762 984 aa23.78■■□□□ 1.4
USP47-205ENST00000525257 CHCHD2P9Q5T1J5 151 aaPredicted RBP23.78■■□□□ 1.4
USP47-205ENST00000525257 ZNF765Q7L2R6 523 aa23.78■■□□□ 1.4
USP47-205ENST00000525257 TRIM11Q96F44 468 aa23.78■■□□□ 1.4
USP47-205ENST00000525257 COX14Q96I36 57 aa23.78■■□□□ 1.4
USP47-205ENST00000525257 SLC45A3Q96JT2 553 aa23.78■■□□□ 1.4
USP47-205ENST00000525257 CATSPER2Q96P56 530 aa23.78■■□□□ 1.4
USP47-205ENST00000525257 TEFMQ96QE5 360 aaKnown RBP23.78■■□□□ 1.4
USP47-205ENST00000525257 RIOK2Q9BVS4 552 aaKnown RBP23.78■■□□□ 1.4
USP47-205ENST00000525257 PCDH18Q9HCL0 1135 aa23.78■■□□□ 1.4
USP47-205ENST00000525257 ZNHIT2Q9UHR6 403 aa23.78■■□□□ 1.4
USP47-205ENST00000525257 TUBD1Q9UJT1 453 aa23.78■■□□□ 1.4
USP47-205ENST00000525257 LRRK2Q5S007 2527 aa23.78■■□□□ 1.4
USP47-205ENST00000525257 RELNP78509 3460 aa23.77■■□□□ 1.4
USP47-205ENST00000525257 A0A0J9YYE9 177 aa23.77■■□□□ 1.4
USP47-205ENST00000525257 TRBC1P01850 177 aa23.77■■□□□ 1.4
USP47-205ENST00000525257 PYGLP06737 847 aa23.77■■□□□ 1.4
USP47-205ENST00000525257 ZNF30P17039 623 aa23.77■■□□□ 1.4
USP47-205ENST00000525257 STC1P52823 247 aa23.77■■□□□ 1.4
USP47-205ENST00000525257 HHEXQ03014 270 aa23.77■■□□□ 1.4
USP47-205ENST00000525257 NFATC2Q13469 925 aa23.77■■□□□ 1.4
USP47-205ENST00000525257 CHST15Q7LFX5 561 aaPredicted RBP23.77■■□□□ 1.4
USP47-205ENST00000525257 UNC5BQ8IZJ1 945 aa23.77■■□□□ 1.4
USP47-205ENST00000525257 NLGN4XQ8N0W4 816 aa23.77■■□□□ 1.4
USP47-205ENST00000525257 NLGN4YQ8NFZ3 816 aaPredicted RBP23.77■■□□□ 1.4
USP47-205ENST00000525257 EXD1Q8NHP7 514 aa23.77■■□□□ 1.4
USP47-205ENST00000525257 NCSTNQ92542 709 aa23.77■■□□□ 1.4
USP47-205ENST00000525257 KIAA1143Q96AT1 154 aaPredicted RBP23.77■■□□□ 1.4
USP47-205ENST00000525257 LOC101059948A0A1B0GTJ6 334 aa23.76■■□□□ 1.39
USP47-205ENST00000525257 CAPN5O15484 640 aaPredicted RBP23.76■■□□□ 1.39
USP47-205ENST00000525257 ATP1A1P05023 1023 aaKnown RBP23.76■■□□□ 1.39
USP47-205ENST00000525257 MYBL1P10243 752 aa23.76■■□□□ 1.39
USP47-205ENST00000525257 MAPK9P45984 424 aa23.76■■□□□ 1.39
USP47-205ENST00000525257 MC2RQ01718 297 aa23.76■■□□□ 1.39
USP47-205ENST00000525257 KLHL30Q0D2K2 578 aa23.76■■□□□ 1.39
USP47-205ENST00000525257 WDR74Q6RFH5 385 aaPredicted RBP23.76■■□□□ 1.39
USP47-205ENST00000525257 CLEC17AQ6ZS10 378 aa23.76■■□□□ 1.39
USP47-205ENST00000525257 ARHGAP22Q7Z5H3 698 aa23.76■■□□□ 1.39
USP47-205ENST00000525257 TEX26Q8N6G2 289 aa23.76■■□□□ 1.39
USP47-205ENST00000525257 SPRY4Q9C004 299 aa23.76■■□□□ 1.39
USP47-205ENST00000525257 POLR1EQ9GZS1 481 aaKnown RBP23.76■■□□□ 1.39
USP47-205ENST00000525257 APMAPQ9HDC9 416 aa23.76■■□□□ 1.39
USP47-205ENST00000525257 RTN4Q9NQC3 1192 aaKnown RBP23.76■■□□□ 1.39
USP47-205ENST00000525257 ZNF71Q9NQZ8 489 aaPredicted RBP23.76■■□□□ 1.39
USP47-205ENST00000525257 AIPL1Q9NZN9 384 aa23.76■■□□□ 1.39
USP47-205ENST00000525257 TBC1D29Q9UFV1 150 aa23.76■■□□□ 1.39
USP47-205ENST00000525257 OAS3Q9Y6K5 1087 aaKnown RBP23.76■■□□□ 1.39
USP47-205ENST00000525257 NBASA2RRP1 2371 aa23.76■■□□□ 1.39
USP47-205ENST00000525257 DNAJC6O75061 913 aa23.75■■□□□ 1.39
USP47-205ENST00000525257 SKILP12757 684 aa23.75■■□□□ 1.39
USP47-205ENST00000525257 MAP4P27816 1152 aaKnown RBP23.75■■□□□ 1.39
USP47-205ENST00000525257 PRKCIP41743 596 aa23.75■■□□□ 1.39
USP47-205ENST00000525257 DSC2Q02487 901 aa23.75■■□□□ 1.39
USP47-205ENST00000525257 CDC20Q12834 499 aa23.75■■□□□ 1.39
USP47-205ENST00000525257 IHHQ14623 411 aa23.75■■□□□ 1.39
USP47-205ENST00000525257 CEACAM20Q6UY09 585 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms