RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 ZNF711Q9Y462 761 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 SPO11Q9Y5K1 396 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 IGF2RP11717 2491 aa12.78□□□□□ -0.36
TRAPPC4-205ENST00000525079 FADS2P1A8MWK0 482 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 AURKAO14965 403 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 MTSS1O43312 755 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 NOBOXO60393 691 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 NDST3O95803 873 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 ADCY8P40145 1251 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 CETN2P41208 172 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 CHRNA4P43681 627 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 EIF3EP60228 445 aaKnown RBP12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 CTBSQ01459 385 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 XRCC4Q13426 336 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 SLC14A2Q15849 920 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 ZNF648Q5T619 568 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 KDELC1Q6UW63 502 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 TMC3Q7Z5M5 1100 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 CACTIN-AS1Q8N1I8 211 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 Q8N9G6 341 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 GPR26Q8NDV2 337 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 GPR156Q8NFN8 814 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 IPMKQ8NFU5 416 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 GPBAR1Q8TDU6 330 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 NAT6Q93015 286 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 NXPE2Q96DL1 559 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 OXNAD1Q96HP4 312 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 DEPDC7Q96QD5 511 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 FCRL5Q96RD9 977 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 GPR63Q9BZJ6 419 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 MAGEE1Q9HCI5 957 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 RSPH14Q9UHP6 348 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 CNOT6Q9ULM6 557 aaKnown RBP12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 PRKAB1Q9Y478 270 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 ST14Q9Y5Y6 855 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 OAS3Q9Y6K5 1087 aaKnown RBP12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 EPG5Q9HCE0 2579 aa12.77□□□□□ -0.37
TRAPPC4-205ENST00000525079 DDX3YO15523 660 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 USP12O75317 370 aa12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 FGF1P05230 155 aa12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 PYGLP06737 847 aa12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 IVLP07476 585 aa12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 RBP3P10745 1247 aa12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 MAZP56270 477 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 CCL7P80098 99 aa12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 ILF3Q12906 894 aaKnown RBP eCLIP12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 SIRPB2Q5JXA9 342 aa12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 HENMT1Q5T8I9 393 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 DARS2Q6PI48 645 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 OGFOD3Q6PK18 319 aa12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 SLC30A9Q6PML9 568 aa12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 SYCE1Q8N0S2 351 aa12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 TXLNBQ8N3L3 684 aa12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 COX14Q96I36 57 aa12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 MRGPRX2Q96LB1 330 aa12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 VAT1Q99536 393 aa12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 SPATA16Q9BXB7 569 aa12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 GSDMCQ9BYG8 508 aa12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 NRSN2Q9GZP1 204 aa12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 BPIFA1Q9NP55 256 aa12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 TRNAU1APQ9NX07 287 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 TAAR2Q9P1P5 351 aa12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 ZNHIT2Q9UHR6 403 aa12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 TRHDEQ9UKU6 1024 aa12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 EFR3BQ9Y2G0 817 aa12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 PCYT1BQ9Y5K3 369 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 ADGRG1Q9Y653 693 aa12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 CAPN6Q9Y6Q1 641 aa12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 RNF215Q9Y6U7 377 aa12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 COL27A1Q8IZC6 1860 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC4-205ENST00000525079 LOC285095A0A1B0GVY8 99 aa12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 RGSL1A5PLK6 1076 aa12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 KCNN4O15554 427 aa12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 TJP3O95049 919 aa12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 AGTP01019 485 aa12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 MPOP05164 745 aa12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 PTMAP06454 111 aaKnown RBP12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 BPIP17213 487 aa12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 PTPN7P35236 360 aa12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 ACTR1BP42025 376 aa12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 GSDMDP57764 484 aa12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 ACTR1AP61163 376 aa12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 RTP5Q14D33 572 aa12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 ISXQ2M1V0 245 aa12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 C14orf28Q4W4Y0 310 aa12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 PYCR3Q53H96 274 aa12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 C19orf48Q6RUI8 117 aa12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 RBM44Q6ZP01 1051 aaKnown RBP12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 CDKL3Q8IVW4 592 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 RAVER1Q8IY67 606 aaKnown RBP12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 UBL4BQ8N7F7 174 aa12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 ZDHHC1Q8WTX9 485 aa12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 PATE1Q8WXA2 126 aa12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 SCARF2Q96GP6 870 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 ATXN7L3BQ96GX2 97 aa12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 OR2M4Q96R27 311 aa12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 GORASP1Q9BQQ3 440 aa12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 ASXL3Q9C0F0 2248 aa12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 LRIT1Q9P2V4 623 aa12.75□□□□□ -0.37
TRAPPC4-205ENST00000525079 DKK4Q9UBT3 224 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms