RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 ERAP2Q6P179 960 aa4.05□□□□□ -1.76
NSMCE2-211ENST00000523549 C8orf82Q6P1X6 216 aaPredicted RBP4.05□□□□□ -1.76
NSMCE2-211ENST00000523549 MUC20Q8N307 709 aaPredicted RBP4.05□□□□□ -1.76
NSMCE2-211ENST00000523549 CHCHD4Q8N4Q1 142 aa4.05□□□□□ -1.76
NSMCE2-211ENST00000523549 SLC25A41Q8N5S1 370 aa4.05□□□□□ -1.76
NSMCE2-211ENST00000523549 DEFB124Q8NES8 71 aa4.05□□□□□ -1.76
NSMCE2-211ENST00000523549 TCEAL3Q969E4 200 aa4.05□□□□□ -1.76
NSMCE2-211ENST00000523549 ARRDC1-AS1Q9H2J1 176 aa4.05□□□□□ -1.76
NSMCE2-211ENST00000523549 PRORYQ9H606 182 aa4.05□□□□□ -1.76
NSMCE2-211ENST00000523549 RNF146Q9NTX7 359 aa4.05□□□□□ -1.76
NSMCE2-211ENST00000523549 MAGED2Q9UNF1 606 aaPredicted RBP4.05□□□□□ -1.76
NSMCE2-211ENST00000523549 MTF2Q9Y483 593 aaPredicted RBP4.05□□□□□ -1.76
NSMCE2-211ENST00000523549 A0A0B4J293 547 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 SPAARA0A1B0GVQ0 90 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 SHISA7A6NL88 538 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 MCIDASD6RGH6 385 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 SLC16A5O15375 505 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 EIF5BO60841 1220 aaKnown RBP4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 DIAPH2O60879 1101 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 SOCS5O75159 536 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 ENTPD3O75355 529 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 RPP40O75818 363 aaKnown RBP4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 PEPDP12955 493 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 PRKAR2BP31323 418 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 GRK5P34947 590 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 SLC16A2P36021 539 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 POU3F1Q03052 451 aaPredicted RBP4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 ACVR2BQ13705 512 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 MPEG1Q2M385 716 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 Q6ZSV7 163 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 NOL8Q76FK4 1167 aaKnown RBP4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 LRRC8DQ7L1W4 858 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 ZNF367Q7RTV3 350 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 TLK2Q86UE8 772 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 OR2C3Q8N628 320 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 SPPL3Q8TCT6 385 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 ZNF419Q96HQ0 510 aaPredicted RBP4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 REXO5Q96IC2 774 aaKnown RBP4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 EDEM2Q9BV94 578 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 PRMT8Q9NR22 394 aaPredicted RBP4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 CHPF2Q9P2E5 772 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 RAB21Q9UL25 225 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 NFU1Q9UMS0 254 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 SLC12A4Q9UP95 1085 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 JMJD1CQ15652 2540 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 NAV1Q8NEY1 1877 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 NOTCH1P46531 2555 aa4.04□□□□□ -1.76
NSMCE2-211ENST00000523549 PKD1L1Q8TDX9 2849 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 RTTNQ86VV8 2226 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 LOXHD1Q8IVV2 1947 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 MED13Q9UHV7 2174 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 CLSPNQ9HAW4 1339 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 APCP25054 2843 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 A0A087WV48 116 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 TRBV5-7A0A0A0MS05 114 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 RASA4BC9J798 803 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 RASA4O43374 803 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 KRT36O76013 467 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 MMP3P08254 477 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 ZNF806P0C7X5 589 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 TDGF1P13385 188 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 CHRNB2P17787 502 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 HSPA7P48741 367 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 ALDH18A1P54886 795 aaKnown RBP4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 FAM3BP58499 235 aaPredicted RBP4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 ILF3Q12906 894 aaKnown RBP eCLIP4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 TRAF3Q13114 568 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 KCNC3Q14003 757 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 MRGPRG-AS1Q2M3A8 158 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 IZUMO3Q5VZ72 239 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 WBP2NLQ6ICG8 309 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 XRRA1Q6P2D8 792 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 AFAP1L1Q8TED9 768 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 TBC1D22AQ8WUA7 517 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 WDR60Q8WVS4 1066 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 POF1BQ8WVV4 589 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 RTP4Q96DX8 246 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 HES6Q96HZ4 224 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 NECTIN4Q96NY8 510 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 POLDIP3Q9BY77 421 aaKnown RBP4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 MROH8Q9H579 483 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 ZNF304Q9HCX3 659 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 CSMD2Q7Z408 3487 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 CACNA1FO60840 1977 aa4.03□□□□□ -1.76
NSMCE2-211ENST00000523549 RP1L1Q8IWN7 2480 aaPredicted RBP4.02□□□□□ -1.77
NSMCE2-211ENST00000523549 PLA2G6O60733 806 aa4.02□□□□□ -1.77
NSMCE2-211ENST00000523549 MYL3P08590 195 aa4.02□□□□□ -1.77
NSMCE2-211ENST00000523549 NPPBP16860 134 aa4.02□□□□□ -1.77
NSMCE2-211ENST00000523549 CSRP1P21291 193 aaKnown RBP4.02□□□□□ -1.77
NSMCE2-211ENST00000523549 KRTAP5-9P26371 169 aa4.02□□□□□ -1.77
NSMCE2-211ENST00000523549 TNFSF8P32971 234 aa4.02□□□□□ -1.77
NSMCE2-211ENST00000523549 STAT1P42224 750 aa4.02□□□□□ -1.77
NSMCE2-211ENST00000523549 RHAGQ02094 409 aa4.02□□□□□ -1.77
NSMCE2-211ENST00000523549 TRAF2Q12933 501 aa4.02□□□□□ -1.77
NSMCE2-211ENST00000523549 ZRSR1Q15695 479 aaKnown RBP4.02□□□□□ -1.77
NSMCE2-211ENST00000523549 TAF1BQ53T94 588 aaPredicted RBP4.02□□□□□ -1.77
NSMCE2-211ENST00000523549 ARL13AQ5H913 290 aaPredicted RBP4.02□□□□□ -1.77
NSMCE2-211ENST00000523549 CES5AQ6NT32 575 aa4.02□□□□□ -1.77
NSMCE2-211ENST00000523549 RINT1Q6NUQ1 792 aa4.02□□□□□ -1.77
NSMCE2-211ENST00000523549 DCLRE1AQ6PJP8 1040 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms