RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 PREBQ9HCU5 417 aa6.46□□□□□ -1.38
VPS13B-211ENST00000522802 ZNF71Q9NQZ8 489 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-211ENST00000522802 KCND1Q9NSA2 647 aa6.46□□□□□ -1.38
VPS13B-211ENST00000522802 GALNT8Q9NY28 637 aa6.46□□□□□ -1.38
VPS13B-211ENST00000522802 NTMQ9P121 344 aa6.46□□□□□ -1.38
VPS13B-211ENST00000522802 ANAPC2Q9UJX6 822 aa6.46□□□□□ -1.38
VPS13B-211ENST00000522802 PNMA8BQ9ULN7 279 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-211ENST00000522802 HBS1LQ9Y450 684 aaKnown RBP6.46□□□□□ -1.38
VPS13B-211ENST00000522802 CEP83Q9Y592 693 aa6.46□□□□□ -1.38
VPS13B-211ENST00000522802 APCP25054 2843 aa6.46□□□□□ -1.38
VPS13B-211ENST00000522802 MED13Q9UHV7 2174 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 TRPM6Q9BX84 2022 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 HIVEP3Q5T1R4 2406 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 POM121BA6NF01 834 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 A6NNZ2 444 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 YJEFN3A6XGL0 299 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 E7ENQ6 273 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 RAD51BO15315 384 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 EIF3DO15371 548 aaKnown RBP eCLIP6.45□□□□□ -1.38
VPS13B-211ENST00000522802 AQP9O43315 295 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 GCATO75600 419 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 CYP7B1O75881 506 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 AGFG2O95081 481 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 ZBED1O96006 694 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 CSF2P04141 144 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 KRT7P08729 469 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 P4HA1P13674 534 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 HNRNPA2B1P22626 353 aaKnown RBP6.45□□□□□ -1.38
VPS13B-211ENST00000522802 AKT2P31751 481 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 MC4RP32245 332 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 DCTP40126 519 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 STAT6P42226 847 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 PIK3CAP42336 1068 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 HNRNPKP61978 463 aaKnown RBP eCLIP6.45□□□□□ -1.38
VPS13B-211ENST00000522802 ADIGQ0VDE8 80 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 FGL2Q14314 439 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 ZACNQ401N2 412 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 RNF187Q5TA31 235 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-211ENST00000522802 RRAGBQ5VZM2 374 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 RNF219Q5W0B1 726 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-211ENST00000522802 DSG4Q86SJ6 1040 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 PARGQ86W56 976 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 CIR1Q86X95 450 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-211ENST00000522802 CCDC65Q8IXS2 484 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 CARFQ8N187 725 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 LMX1AQ8TE12 382 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 PARD3BQ8TEW8 1205 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 ZNF768Q9H5H4 540 aaKnown RBP6.45□□□□□ -1.38
VPS13B-211ENST00000522802 APOBEC3GQ9HC16 384 aaKnown RBP6.45□□□□□ -1.38
VPS13B-211ENST00000522802 OLA1Q9NTK5 396 aaKnown RBP6.45□□□□□ -1.38
VPS13B-211ENST00000522802 NCKIPSDQ9NZQ3 722 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 SEPT10Q9P0V9 454 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 XPO7Q9UIA9 1087 aaKnown RBP6.45□□□□□ -1.38
VPS13B-211ENST00000522802 ZFP69BQ9UJL9 534 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 FBXO2Q9UK22 296 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-211ENST00000522802 CROTQ9UKG9 612 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 ZFR2Q9UPR6 939 aaKnown RBP6.45□□□□□ -1.38
VPS13B-211ENST00000522802 LOXL2Q9Y4K0 774 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 RP1L1Q8IWN7 2480 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-211ENST00000522802 DNHD1Q96M86 4753 aa6.45□□□□□ -1.38
VPS13B-211ENST00000522802 SPTY2D1-AS1A0A0U1RR47 76 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 A0A1B0GTL3 188 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 A0A1W2PQM1 296 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 NVLO15381 856 aaKnown RBP6.44□□□□□ -1.38
VPS13B-211ENST00000522802 IRAK2O43187 625 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 ACSL4O60488 711 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 LUC7L3O95232 432 aaKnown RBP6.44□□□□□ -1.38
VPS13B-211ENST00000522802 FKBP9O95302 570 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 KNG1P01042 644 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 HLA-DRAP01903 254 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 RPLP0P05388 317 aaKnown RBP6.44□□□□□ -1.38
VPS13B-211ENST00000522802 CTSLP07711 333 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 ZNF28P17035 718 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 NR1D1P20393 614 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 GNLYP22749 145 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 GLRBP48167 497 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 SLC11A2P49281 568 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 OCRLQ01968 901 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 EIF3IQ13347 325 aaKnown RBP6.44□□□□□ -1.38
VPS13B-211ENST00000522802 C1orf61Q13536 156 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 SGSM1Q2NKQ1 1148 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 GOLGA7BQ2TAP0 167 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 KRTAP19-4Q3LI73 84 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 C1orf220Q5T0J3 134 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 BSPRYQ5W0U4 402 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 PM20D1Q6GTS8 502 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 KYAT3Q6YP21 454 aaKnown RBP6.44□□□□□ -1.38
VPS13B-211ENST00000522802 LCNL1Q6ZST4 164 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 STXBP4Q6ZWJ1 553 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 FKBP9P1Q75LS8 142 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 HORMAD1Q86X24 394 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 TICAM1Q8IUC6 712 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 SDR16C5Q8N3Y7 309 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 STPG3Q8N7X2 389 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 C9orf43Q8TAL5 461 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-211ENST00000522802 RNF139Q8WU17 664 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 OR8D1Q8WZ84 308 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 NAT6Q93015 286 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 SCYL1Q96KG9 808 aa6.44□□□□□ -1.38
VPS13B-211ENST00000522802 BMFQ96LC9 184 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms