RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 PRSS45Q7RTY3 260 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 TMPRSS9Q7Z410 1059 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 NUDT13Q86X67 352 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 RFX6Q8HWS3 928 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 CFAP206Q8IYR0 622 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 PDCL2Q8N4E4 241 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 OR52L2PQ8NGH6 319 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 OR2T34Q8NGX1 318 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 ZFP28Q8NHY6 868 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 C9orf43Q8TAL5 461 aaPredicted RBP4.03□□□□□ -1.76
SKP1-209ENST00000522552 HEXDCQ8WVB3 486 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 SPSB1Q96BD6 273 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 NXNL1Q96CM4 212 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 RNF31Q96EP0 1072 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 CCDC51Q96ER9 411 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 DTD2Q96FN9 168 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 DIRC2Q96SL1 478 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 TPPP3Q9BW30 176 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 C1QTNF5Q9BXJ0 243 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 RAB33BQ9H082 229 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 S1PR5Q9H228 398 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 EPC1Q9H2F5 836 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 TFB2MQ9H5Q4 396 aaKnown RBP4.03□□□□□ -1.76
SKP1-209ENST00000522552 MINDY3Q9H8M7 445 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 PCDH18Q9HCL0 1135 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 PNPLA3Q9NST1 481 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 PRMT7Q9NVM4 692 aaPredicted RBP4.03□□□□□ -1.76
SKP1-209ENST00000522552 FAM118AQ9NWS6 357 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 MTUS1Q9ULD2 1270 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 SNX7Q9UNH6 387 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 SNX6Q9UNH7 406 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 KCNK6Q9Y257 313 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.03□□□□□ -1.76
SKP1-209ENST00000522552 CHTOPQ9Y3Y2 248 aaKnown RBP4.03□□□□□ -1.76
SKP1-209ENST00000522552 H3BQ06 376 aaPredicted RBP4.03□□□□□ -1.76
SKP1-209ENST00000522552 KIF2AO00139 706 aaPredicted RBP4.03□□□□□ -1.76
SKP1-209ENST00000522552 CTAGE5O15320 804 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 SEC14L5O43304 696 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 HOXA3O43365 443 aaPredicted RBP4.03□□□□□ -1.76
SKP1-209ENST00000522552 NUDT21O43809 227 aaKnown RBP4.03□□□□□ -1.76
SKP1-209ENST00000522552 OR6B1O95007 311 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 TFP02787 698 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 ERBB2P04626 1255 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 C8AP07357 584 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 HOXB5P09067 269 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 EBLN1P0CF75 366 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 ACTN1P12814 892 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 TCF4P15884 667 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 PFKFB1P16118 471 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 NR2F2P24468 414 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 ACP1P24666 158 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 GSTM2P28161 218 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 ACADLP28330 430 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 CCR1P32246 355 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 CDKN1AP38936 164 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 MC3RP41968 323 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 RRADP55042 308 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 TFAP4Q01664 338 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 ZP2Q05996 745 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 DNASE1L3Q13609 305 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 DDX39BQ13838 428 aaKnown RBP4.03□□□□□ -1.76
SKP1-209ENST00000522552 PTPRCAPQ14761 206 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 DRAP1Q14919 205 aaPredicted RBP4.03□□□□□ -1.76
SKP1-209ENST00000522552 HIST2H2ACQ16777 129 aaPredicted RBP4.03□□□□□ -1.76
SKP1-209ENST00000522552 LRRC23Q53EV4 343 aaPredicted RBP4.03□□□□□ -1.76
SKP1-209ENST00000522552 LRIF1Q5T3J3 769 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 AGBL4Q5VU57 503 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 DHRS7BQ6IAN0 325 aaPredicted RBP4.03□□□□□ -1.76
SKP1-209ENST00000522552 TMEM88Q6PEY1 159 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 WDR88Q6ZMY6 472 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 ZNF551Q7Z340 670 aaPredicted RBP4.03□□□□□ -1.76
SKP1-209ENST00000522552 ADGRE4PQ86SQ3 457 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 CAND1Q86VP6 1230 aaKnown RBP4.03□□□□□ -1.76
SKP1-209ENST00000522552 WDR5BQ86VZ2 330 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 RASAL3Q86YV0 1011 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 MCEMP1Q8IX19 187 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 ZNF595Q8IYB9 648 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 PM20D2Q8IYS1 436 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 ZNF679Q8IYX0 411 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 L3MBTL4Q8NA19 623 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 SLC24A4Q8NFF2 622 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 OR52K1Q8NGK4 314 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 OR13C2Q8NGS9 318 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 OR8K5Q8NH50 307 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 NCOA7Q8NI08 942 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 ZNF671Q8TAW3 534 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 ATG4AQ8WYN0 398 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 ZCCHC14Q8WYQ9 949 aaKnown RBP4.03□□□□□ -1.76
SKP1-209ENST00000522552 ANP32BQ92688 251 aaKnown RBP4.03□□□□□ -1.76
SKP1-209ENST00000522552 NSMCE2Q96MF7 247 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 KLHL5Q96PQ7 755 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 PAIP2Q9BPZ3 127 aaKnown RBP4.03□□□□□ -1.76
SKP1-209ENST00000522552 GORASP1Q9BQQ3 440 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 CCDC77Q9BR77 488 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 ZNF577Q9BSK1 485 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 ZSCAN5AQ9BUG6 496 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 DPCDQ9BVM2 203 aaPredicted RBP4.03□□□□□ -1.76
SKP1-209ENST00000522552 NFKBIZQ9BYH8 718 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 SPATC1LQ9H0A9 340 aa4.03□□□□□ -1.76
SKP1-209ENST00000522552 TMEM168Q9H0V1 697 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms