RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 SETD7Q8WTS6 366 aaKnown RBP9.41□□□□□ -0.9
CLK4-209ENST00000521621 SCG3Q8WXD2 468 aaKnown RBP9.41□□□□□ -0.9
CLK4-209ENST00000521621 RUNDC3BQ96NL0 473 aa9.41□□□□□ -0.9
CLK4-209ENST00000521621 FSD1LQ9BXM9 530 aa9.41□□□□□ -0.9
CLK4-209ENST00000521621 CLPBQ9H078 707 aa9.41□□□□□ -0.9
CLK4-209ENST00000521621 TRIM39Q9HCM9 518 aa9.41□□□□□ -0.9
CLK4-209ENST00000521621 SNX12Q9UMY4 172 aa9.41□□□□□ -0.9
CLK4-209ENST00000521621 SPO11Q9Y5K1 396 aa9.41□□□□□ -0.9
CLK4-209ENST00000521621 PLXNB3Q9ULL4 1909 aa9.4□□□□□ -0.9
CLK4-209ENST00000521621 USP34Q70CQ2 3546 aa9.4□□□□□ -0.9
CLK4-209ENST00000521621 DOCK9Q9BZ29 2069 aa9.4□□□□□ -0.9
CLK4-209ENST00000521621 PMPCBO75439 489 aa9.4□□□□□ -0.9
CLK4-209ENST00000521621 RFPL3O75679 317 aa9.4□□□□□ -0.9
CLK4-209ENST00000521621 TPSB2P20231 275 aa9.4□□□□□ -0.9
CLK4-209ENST00000521621 SPAM1P38567 509 aa9.4□□□□□ -0.9
CLK4-209ENST00000521621 FNTAP49354 379 aa9.4□□□□□ -0.9
CLK4-209ENST00000521621 ACVR1Q04771 509 aa9.4□□□□□ -0.9
CLK4-209ENST00000521621 ITGA9Q13797 1035 aa9.4□□□□□ -0.9
CLK4-209ENST00000521621 TPSAB1Q15661 275 aa9.4□□□□□ -0.9
CLK4-209ENST00000521621 ENPP7Q6UWV6 458 aa9.4□□□□□ -0.9
CLK4-209ENST00000521621 NLRP9Q7RTR0 991 aa9.4□□□□□ -0.9
CLK4-209ENST00000521621 GPR156Q8NFN8 814 aa9.4□□□□□ -0.9
CLK4-209ENST00000521621 LRRN4Q8WUT4 740 aa9.4□□□□□ -0.9
CLK4-209ENST00000521621 OR1E3Q8WZA6 343 aa9.4□□□□□ -0.9
CLK4-209ENST00000521621 NAT6Q93015 286 aa9.4□□□□□ -0.9
CLK4-209ENST00000521621 RIOK2Q9BVS4 552 aaKnown RBP9.4□□□□□ -0.9
CLK4-209ENST00000521621 GSDMCQ9BYG8 508 aa9.4□□□□□ -0.9
CLK4-209ENST00000521621 CEP41Q9BYV8 373 aa9.4□□□□□ -0.9
CLK4-209ENST00000521621 APPL1Q9UKG1 709 aa9.4□□□□□ -0.9
CLK4-209ENST00000521621 NEU2Q9Y3R4 380 aa9.4□□□□□ -0.9
CLK4-209ENST00000521621 TTLL3Q9Y4R7 772 aa9.4□□□□□ -0.9
CLK4-209ENST00000521621 EME2A4GXA9 379 aaPredicted RBP9.4□□□□□ -0.91
CLK4-209ENST00000521621 MROH6A6NGR9 719 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 C2orf81A6NN90 581 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 TRIM38O00635 465 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 SIGLEC6O43699 453 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 FGGP02679 453 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 PTMAP06454 111 aaKnown RBP9.4□□□□□ -0.91
CLK4-209ENST00000521621 BPIP17213 487 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 LPOP22079 712 aaPredicted RBP9.4□□□□□ -0.91
CLK4-209ENST00000521621 HADHAP40939 763 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 ZNF140P52738 457 aaPredicted RBP9.4□□□□□ -0.91
CLK4-209ENST00000521621 DMPKQ09013 629 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 NR0B2Q15466 257 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 PYCR3Q53H96 274 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 LDLRAP1Q5SW96 308 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 FAXCQ5TGI0 409 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 RAET1GQ6H3X3 334 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 IGF2-ASQ6U949 168 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 PAF1Q8N7H5 531 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 ARL10Q8N8L6 244 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 FAM71DQ8N9W8 422 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 GPR26Q8NDV2 337 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 DDHD1Q8NEL9 900 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 CCDC110Q8TBZ0 833 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 PTCD2Q8WV60 388 aaKnown RBP9.4□□□□□ -0.91
CLK4-209ENST00000521621 ULK4Q96C45 1275 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 TIMM29Q9BSF4 260 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 GPR63Q9BZJ6 419 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 UCK1Q9HA47 277 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 MRM3Q9HC36 420 aaKnown RBP9.4□□□□□ -0.91
CLK4-209ENST00000521621 FGF22Q9HCT0 170 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 CASS4Q9NQ75 786 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 GPR34Q9UPC5 381 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 MSRB2Q9Y3D2 182 aa9.4□□□□□ -0.91
CLK4-209ENST00000521621 TRBV5-4A0A0C4DH59 114 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 TMEM202A6NGA9 273 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 FADS2P1A8MWK0 482 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 PGRMC1O00264 195 aaKnown RBP9.39□□□□□ -0.91
CLK4-209ENST00000521621 METTL18O95568 372 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 ANXA6P08133 673 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 GDF10P55107 478 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 GPR33Q49SQ1 333 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 AGAP9Q5VTM2 703 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 WASH2PQ6VEQ5 465 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 PELI3Q8N2H9 469 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 EID2Q8N6I1 236 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 PRELID2Q8N945 189 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 IPMKQ8NFU5 416 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 GLYATL1Q969I3 302 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 ZNF514Q96K75 400 aaPredicted RBP9.39□□□□□ -0.91
CLK4-209ENST00000521621 OSBPL9Q96SU4 736 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 TMEM121Q9BTD3 319 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 FICDQ9BVA6 458 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 LGR4Q9BXB1 951 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 WASH6PQ9NQA3 447 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 NLE1Q9NVX2 485 aaPredicted RBP9.39□□□□□ -0.91
CLK4-209ENST00000521621 UCKL1Q9NWZ5 548 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 OR1A2Q9Y585 309 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 PTPRBP23467 1997 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 GAPDHSO14556 408 aaPredicted RBP9.39□□□□□ -0.91
CLK4-209ENST00000521621 YY2O15391 372 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 NUAK1O60285 661 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 TCEA3O75764 348 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 SLC2A4P14672 509 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 SIM1P81133 766 aaPredicted RBP9.39□□□□□ -0.91
CLK4-209ENST00000521621 CDH17Q12864 832 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 PCSK7Q16549 785 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 LONRF2Q1L5Z9 754 aa9.39□□□□□ -0.91
CLK4-209ENST00000521621 SYDE1Q6ZW31 735 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms