RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 OR2M4Q96R27 311 aa20.17■□□□□ 0.82
PABPC1-217ENST00000521067 WDR24Q96S15 920 aa20.17■□□□□ 0.82
PABPC1-217ENST00000521067 RCOR3Q9P2K3 495 aaPredicted RBP20.17■□□□□ 0.82
PABPC1-217ENST00000521067 CNOT6Q9ULM6 557 aaKnown RBP20.17■□□□□ 0.82
PABPC1-217ENST00000521067 CHKBQ9Y259 395 aa20.17■□□□□ 0.82
PABPC1-217ENST00000521067 PCDHB11Q9Y5F2 797 aa20.17■□□□□ 0.82
PABPC1-217ENST00000521067 COL12A1Q99715 3063 aa20.17■□□□□ 0.82
PABPC1-217ENST00000521067 MATN3O15232 486 aa20.16■□□□□ 0.82
PABPC1-217ENST00000521067 CLDN7O95471 211 aa20.16■□□□□ 0.82
PABPC1-217ENST00000521067 CD82P27701 267 aa20.16■□□□□ 0.82
PABPC1-217ENST00000521067 NFKB2Q00653 900 aa20.16■□□□□ 0.82
PABPC1-217ENST00000521067 PAFAH1B3Q15102 231 aaKnown RBP20.16■□□□□ 0.82
PABPC1-217ENST00000521067 FAM182AQ5T1J6 154 aa20.16■□□□□ 0.82
PABPC1-217ENST00000521067 SYN2Q92777 582 aaPredicted RBP20.16■□□□□ 0.82
PABPC1-217ENST00000521067 TAAR9Q96RI9 348 aa20.16■□□□□ 0.82
PABPC1-217ENST00000521067 RIOK2Q9BVS4 552 aaKnown RBP20.16■□□□□ 0.82
PABPC1-217ENST00000521067 POLR1EQ9GZS1 481 aaKnown RBP20.16■□□□□ 0.82
PABPC1-217ENST00000521067 RBM22Q9NW64 420 aaKnown RBP eCLIP20.16■□□□□ 0.82
PABPC1-217ENST00000521067 AKAP7Q9P0M2 348 aaPredicted RBP20.16■□□□□ 0.82
PABPC1-217ENST00000521067 PRKAB1Q9Y478 270 aa20.16■□□□□ 0.82
PABPC1-217ENST00000521067 PCDHGA3Q9Y5H0 932 aa20.16■□□□□ 0.82
PABPC1-217ENST00000521067 OAS3Q9Y6K5 1087 aaKnown RBP20.16■□□□□ 0.82
PABPC1-217ENST00000521067 SDK2Q58EX2 2172 aa20.15■□□□□ 0.82
PABPC1-217ENST00000521067 HECTD1Q9ULT8 2610 aa20.15■□□□□ 0.82
PABPC1-217ENST00000521067 A0A1W2PQJ5 194 aa20.15■□□□□ 0.82
PABPC1-217ENST00000521067 MYO1FO00160 1098 aa20.15■□□□□ 0.82
PABPC1-217ENST00000521067 INPP4BO15327 924 aa20.15■□□□□ 0.82
PABPC1-217ENST00000521067 SERPING1P05155 500 aa20.15■□□□□ 0.82
PABPC1-217ENST00000521067 THRAP10827 490 aa20.15■□□□□ 0.82
PABPC1-217ENST00000521067 SSR1P43307 286 aaKnown RBP20.15■□□□□ 0.82
PABPC1-217ENST00000521067 BIRC2Q13490 618 aa20.15■□□□□ 0.82
PABPC1-217ENST00000521067 CCDC122Q5T0U0 273 aa20.15■□□□□ 0.82
PABPC1-217ENST00000521067 TMEM164Q5U3C3 297 aa20.15■□□□□ 0.82
PABPC1-217ENST00000521067 CAVIN1Q6NZI2 390 aaKnown RBP20.15■□□□□ 0.82
PABPC1-217ENST00000521067 ZNF765Q7L2R6 523 aa20.15■□□□□ 0.82
PABPC1-217ENST00000521067 SLC37A2Q8TED4 501 aa20.15■□□□□ 0.82
PABPC1-217ENST00000521067 CPLX3Q8WVH0 158 aa20.15■□□□□ 0.82
PABPC1-217ENST00000521067 NKD1Q969G9 470 aa20.15■□□□□ 0.82
PABPC1-217ENST00000521067 TDRD1Q9BXT4 1180 aaKnown RBP20.15■□□□□ 0.82
PABPC1-217ENST00000521067 CDH19Q9H159 772 aa20.15■□□□□ 0.82
PABPC1-217ENST00000521067 STARD5Q9NSY2 213 aa20.15■□□□□ 0.82
PABPC1-217ENST00000521067 OCIAD1Q9NX40 245 aa20.15■□□□□ 0.82
PABPC1-217ENST00000521067 KCNK4Q9NYG8 393 aa20.15■□□□□ 0.82
PABPC1-217ENST00000521067 B3GALT1Q9Y5Z6 326 aa20.15■□□□□ 0.82
PABPC1-217ENST00000521067 BZW2Q9Y6E2 419 aaKnown RBP20.15■□□□□ 0.82
PABPC1-217ENST00000521067 DNAJC6O75061 913 aa20.14■□□□□ 0.81
PABPC1-217ENST00000521067 ATP1A1P05023 1023 aaKnown RBP20.14■□□□□ 0.81
PABPC1-217ENST00000521067 ZNF30P17039 623 aa20.14■□□□□ 0.81
PABPC1-217ENST00000521067 FASLGP48023 281 aa20.14■□□□□ 0.81
PABPC1-217ENST00000521067 TAS2R40P59535 323 aa20.14■□□□□ 0.81
PABPC1-217ENST00000521067 FANCCQ00597 558 aa20.14■□□□□ 0.81
PABPC1-217ENST00000521067 SLC10A2Q12908 348 aaPredicted RBP20.14■□□□□ 0.81
PABPC1-217ENST00000521067 TRA2AQ13595 282 aaKnown RBP eCLIP20.14■□□□□ 0.81
PABPC1-217ENST00000521067 CLCA4Q14CN2 919 aa20.14■□□□□ 0.81
PABPC1-217ENST00000521067 ANKRD20A8PQ5CZ79 823 aa20.14■□□□□ 0.81
PABPC1-217ENST00000521067 ALKBH5Q6P6C2 394 aaKnown RBP20.14■□□□□ 0.81
PABPC1-217ENST00000521067 XKR5Q6UX68 686 aa20.14■□□□□ 0.81
PABPC1-217ENST00000521067 PRICKLE2Q7Z3G6 844 aa20.14■□□□□ 0.81
PABPC1-217ENST00000521067 NDUFAF2Q8N183 169 aa20.14■□□□□ 0.81
PABPC1-217ENST00000521067 SFRP1Q8N474 314 aa20.14■□□□□ 0.81
PABPC1-217ENST00000521067 PQLC3Q8N755 202 aa20.14■□□□□ 0.81
PABPC1-217ENST00000521067 EXD1Q8NHP7 514 aa20.14■□□□□ 0.81
PABPC1-217ENST00000521067 ART4Q93070 314 aa20.14■□□□□ 0.81
PABPC1-217ENST00000521067 TSGA13Q96PP4 275 aa20.14■□□□□ 0.81
PABPC1-217ENST00000521067 PDP2Q9P2J9 529 aa20.14■□□□□ 0.81
PABPC1-217ENST00000521067 NENFQ9UMX5 172 aa20.14■□□□□ 0.81
PABPC1-217ENST00000521067 STMND1H3BQB6 276 aa20.13■□□□□ 0.81
PABPC1-217ENST00000521067 ZW10O43264 779 aa20.13■□□□□ 0.81
PABPC1-217ENST00000521067 HLA-DQB2P05538 268 aa20.13■□□□□ 0.81
PABPC1-217ENST00000521067 CCNCP24863 283 aa20.13■□□□□ 0.81
PABPC1-217ENST00000521067 UGT1A3P35503 534 aa20.13■□□□□ 0.81
PABPC1-217ENST00000521067 GJC1P36383 396 aa20.13■□□□□ 0.81
PABPC1-217ENST00000521067 EPHB1P54762 984 aa20.13■□□□□ 0.81
PABPC1-217ENST00000521067 GBE1Q04446 702 aa20.13■□□□□ 0.81
PABPC1-217ENST00000521067 NFKBIBQ15653 356 aa20.13■□□□□ 0.81
PABPC1-217ENST00000521067 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.13■□□□□ 0.81
PABPC1-217ENST00000521067 TMEM71Q6P5X7 295 aa20.13■□□□□ 0.81
PABPC1-217ENST00000521067 GALNT13Q8IUC8 556 aa20.13■□□□□ 0.81
PABPC1-217ENST00000521067 NRSN1Q8IZ57 195 aa20.13■□□□□ 0.81
PABPC1-217ENST00000521067 AGBL5Q8NDL9 886 aa20.13■□□□□ 0.81
PABPC1-217ENST00000521067 FATE1Q969F0 183 aa20.13■□□□□ 0.81
PABPC1-217ENST00000521067 ARHGAP9Q9BRR9 750 aa20.13■□□□□ 0.81
PABPC1-217ENST00000521067 SLC12A9Q9BXP2 914 aa20.13■□□□□ 0.81
PABPC1-217ENST00000521067 CBX8Q9HC52 389 aa20.13■□□□□ 0.81
PABPC1-217ENST00000521067 CAPN11Q9UMQ6 739 aa20.13■□□□□ 0.81
PABPC1-217ENST00000521067 CYSRT1A8MQ03 144 aa20.12■□□□□ 0.81
PABPC1-217ENST00000521067 FADS2P1A8MWK0 482 aa20.12■□□□□ 0.81
PABPC1-217ENST00000521067 WISP1O95388 367 aa20.12■□□□□ 0.81
PABPC1-217ENST00000521067 ASMTLO95671 621 aa20.12■□□□□ 0.81
PABPC1-217ENST00000521067 MMP2P08253 660 aa20.12■□□□□ 0.81
PABPC1-217ENST00000521067 ZBED6P86452 979 aa20.12■□□□□ 0.81
PABPC1-217ENST00000521067 KCNC4Q03721 635 aa20.12■□□□□ 0.81
PABPC1-217ENST00000521067 PEX6Q13608 980 aa20.12■□□□□ 0.81
PABPC1-217ENST00000521067 IFI16Q16666 785 aaKnown RBP20.12■□□□□ 0.81
PABPC1-217ENST00000521067 LUZP1Q86V48 1076 aa20.12■□□□□ 0.81
PABPC1-217ENST00000521067 BMPERQ8N8U9 685 aa20.12■□□□□ 0.81
PABPC1-217ENST00000521067 ZSCAN1Q8NBB4 408 aa20.12■□□□□ 0.81
PABPC1-217ENST00000521067 KCTD6Q8NC69 237 aa20.12■□□□□ 0.81
PABPC1-217ENST00000521067 LPCAT1Q8NF37 534 aa20.12■□□□□ 0.81
PABPC1-217ENST00000521067 FAF2Q96CS3 445 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms