RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 MARK2Q7KZI7 788 aaKnown RBP20.41■□□□□ 0.86
SNHG6-203ENST00000520944 PIM3Q86V86 326 aa20.41■□□□□ 0.86
SNHG6-203ENST00000520944 RFX6Q8HWS3 928 aa20.41■□□□□ 0.86
SNHG6-203ENST00000520944 GALNT13Q8IUC8 556 aa20.41■□□□□ 0.86
SNHG6-203ENST00000520944 RHOT1Q8IXI2 618 aa20.41■□□□□ 0.86
SNHG6-203ENST00000520944 PTCD2Q8WV60 388 aaKnown RBP20.41■□□□□ 0.86
SNHG6-203ENST00000520944 SCARF2Q96GP6 870 aaPredicted RBP20.41■□□□□ 0.86
SNHG6-203ENST00000520944 OR2M4Q96R27 311 aa20.41■□□□□ 0.86
SNHG6-203ENST00000520944 LYSMD1Q96S90 227 aa20.41■□□□□ 0.86
SNHG6-203ENST00000520944 AGAP2Q99490 1192 aa20.41■□□□□ 0.86
SNHG6-203ENST00000520944 CPNE5Q9HCH3 593 aa20.41■□□□□ 0.86
SNHG6-203ENST00000520944 DDX56Q9NY93 547 aaKnown RBP20.41■□□□□ 0.86
SNHG6-203ENST00000520944 PKD2L2Q9NZM6 624 aa20.41■□□□□ 0.86
SNHG6-203ENST00000520944 SEPT10Q9P0V9 454 aa20.41■□□□□ 0.86
SNHG6-203ENST00000520944 INTUQ9ULD6 942 aa20.41■□□□□ 0.86
SNHG6-203ENST00000520944 SHROOM3Q8TF72 1996 aa20.41■□□□□ 0.86
SNHG6-203ENST00000520944 C3orf70A6NLC5 250 aaPredicted RBP20.4■□□□□ 0.86
SNHG6-203ENST00000520944 TK2O00142 265 aa20.4■□□□□ 0.86
SNHG6-203ENST00000520944 ATXN7O15265 892 aaPredicted RBP20.4■□□□□ 0.86
SNHG6-203ENST00000520944 INPP4BO15327 924 aa20.4■□□□□ 0.86
SNHG6-203ENST00000520944 KALRNO60229 2985 aa20.4■□□□□ 0.86
SNHG6-203ENST00000520944 LRP4O75096 1905 aa20.4■□□□□ 0.86
SNHG6-203ENST00000520944 MMP2P08253 660 aa20.4■□□□□ 0.86
SNHG6-203ENST00000520944 OR1D5P58170 312 aa20.4■□□□□ 0.86
SNHG6-203ENST00000520944 SKOR1P84550 965 aa20.4■□□□□ 0.86
SNHG6-203ENST00000520944 B4GALNT1Q00973 533 aa20.4■□□□□ 0.86
SNHG6-203ENST00000520944 ZFP36L1Q07352 338 aaKnown RBP20.4■□□□□ 0.86
SNHG6-203ENST00000520944 QPCTQ16769 361 aa20.4■□□□□ 0.86
SNHG6-203ENST00000520944 PHF19Q5T6S3 580 aa20.4■□□□□ 0.86
SNHG6-203ENST00000520944 TRIM74Q86UV6 250 aa20.4■□□□□ 0.86
SNHG6-203ENST00000520944 C17orf82Q86X59 251 aaPredicted RBP20.4■□□□□ 0.86
SNHG6-203ENST00000520944 LSM14AQ8ND56 463 aaKnown RBP20.4■□□□□ 0.86
SNHG6-203ENST00000520944 SLC39A7Q92504 469 aa20.4■□□□□ 0.86
SNHG6-203ENST00000520944 RNF25Q96BH1 459 aaPredicted RBP20.4■□□□□ 0.86
SNHG6-203ENST00000520944 CMKLR1Q99788 373 aa20.4■□□□□ 0.86
SNHG6-203ENST00000520944 BRD8Q9H0E9 1235 aa20.4■□□□□ 0.86
SNHG6-203ENST00000520944 FAM83DQ9H4H8 585 aa20.4■□□□□ 0.86
SNHG6-203ENST00000520944 WDR70Q9NW82 654 aa20.4■□□□□ 0.86
SNHG6-203ENST00000520944 AKAP7Q9P0M2 348 aaPredicted RBP20.4■□□□□ 0.86
SNHG6-203ENST00000520944 ZNHIT2Q9UHR6 403 aa20.4■□□□□ 0.86
SNHG6-203ENST00000520944 LOXL2Q9Y4K0 774 aa20.4■□□□□ 0.86
SNHG6-203ENST00000520944 PCDHGA7Q9Y5G6 932 aa20.4■□□□□ 0.86
SNHG6-203ENST00000520944 RGSL1A5PLK6 1076 aa20.39■□□□□ 0.85
SNHG6-203ENST00000520944 B4GAT1O43505 415 aa20.39■□□□□ 0.85
SNHG6-203ENST00000520944 SPOPO43791 374 aa20.39■□□□□ 0.85
SNHG6-203ENST00000520944 CPNE6O95741 557 aa20.39■□□□□ 0.85
SNHG6-203ENST00000520944 HGFP14210 728 aa20.39■□□□□ 0.85
SNHG6-203ENST00000520944 SLC5A2P31639 672 aa20.39■□□□□ 0.85
SNHG6-203ENST00000520944 GPR3P46089 330 aa20.39■□□□□ 0.85
SNHG6-203ENST00000520944 SPINT3P49223 89 aa20.39■□□□□ 0.85
SNHG6-203ENST00000520944 ZBTB17Q13105 803 aa20.39■□□□□ 0.85
SNHG6-203ENST00000520944 LRP8Q14114 963 aa20.39■□□□□ 0.85
SNHG6-203ENST00000520944 PYCR3Q53H96 274 aa20.39■□□□□ 0.85
SNHG6-203ENST00000520944 BZW1Q7L1Q6 419 aaKnown RBP20.39■□□□□ 0.85
SNHG6-203ENST00000520944 ZNF438Q7Z4V0 828 aa20.39■□□□□ 0.85
SNHG6-203ENST00000520944 NT5DC3Q86UY8 548 aa20.39■□□□□ 0.85
SNHG6-203ENST00000520944 CNTD1Q8N815 330 aa20.39■□□□□ 0.85
SNHG6-203ENST00000520944 COX14Q96I36 57 aa20.39■□□□□ 0.85
SNHG6-203ENST00000520944 AGAP3Q96P47 875 aa20.39■□□□□ 0.85
SNHG6-203ENST00000520944 PISDQ9UG56 409 aa20.39■□□□□ 0.85
SNHG6-203ENST00000520944 PLEKHM1Q9Y4G2 1056 aa20.39■□□□□ 0.85
SNHG6-203ENST00000520944 ST14Q9Y5Y6 855 aa20.39■□□□□ 0.85
SNHG6-203ENST00000520944 AGRPO00253 132 aa20.38■□□□□ 0.85
SNHG6-203ENST00000520944 NOP2P46087 812 aaKnown RBP20.38■□□□□ 0.85
SNHG6-203ENST00000520944 DYNLT1P63172 113 aa20.38■□□□□ 0.85
SNHG6-203ENST00000520944 VAC14Q08AM6 782 aa20.38■□□□□ 0.85
SNHG6-203ENST00000520944 CLPPQ16740 277 aaPredicted RBP20.38■□□□□ 0.85
SNHG6-203ENST00000520944 NPNTQ6UXI9 565 aa20.38■□□□□ 0.85
SNHG6-203ENST00000520944 USP53Q70EK8 1073 aa20.38■□□□□ 0.85
SNHG6-203ENST00000520944 KDELC2Q7Z4H8 507 aa20.38■□□□□ 0.85
SNHG6-203ENST00000520944 NAGSQ8N159 534 aa20.38■□□□□ 0.85
SNHG6-203ENST00000520944 CEP41Q9BYV8 373 aa20.38■□□□□ 0.85
SNHG6-203ENST00000520944 RDH14Q9HBH5 336 aa20.38■□□□□ 0.85
SNHG6-203ENST00000520944 VPS18Q9P253 973 aa20.38■□□□□ 0.85
SNHG6-203ENST00000520944 ATP1A1P05023 1023 aaKnown RBP20.37■□□□□ 0.85
SNHG6-203ENST00000520944 COMTP21964 271 aa20.37■□□□□ 0.85
SNHG6-203ENST00000520944 NR2C2P49116 596 aa20.37■□□□□ 0.85
SNHG6-203ENST00000520944 RHDQ02161 417 aa20.37■□□□□ 0.85
SNHG6-203ENST00000520944 GALNT3Q14435 633 aa20.37■□□□□ 0.85
SNHG6-203ENST00000520944 NR1D2Q14995 579 aa20.37■□□□□ 0.85
SNHG6-203ENST00000520944 TCEAL1Q15170 157 aa20.37■□□□□ 0.85
SNHG6-203ENST00000520944 CCDC70Q6NSX1 233 aa20.37■□□□□ 0.85
SNHG6-203ENST00000520944 SLITRK4Q8IW52 837 aa20.37■□□□□ 0.85
SNHG6-203ENST00000520944 PATE1Q8WXA2 126 aa20.37■□□□□ 0.85
SNHG6-203ENST00000520944 IMP4Q96G21 291 aaKnown RBP20.37■□□□□ 0.85
SNHG6-203ENST00000520944 TRIM5Q9C035 493 aa20.37■□□□□ 0.85
SNHG6-203ENST00000520944 SLC25A51Q9H1U9 297 aa20.37■□□□□ 0.85
SNHG6-203ENST00000520944 SEMA6CQ9H3T2 930 aa20.37■□□□□ 0.85
SNHG6-203ENST00000520944 ZFYVE1Q9HBF4 777 aa20.37■□□□□ 0.85
SNHG6-203ENST00000520944 HYOU1Q9Y4L1 999 aa20.37■□□□□ 0.85
SNHG6-203ENST00000520944 FASNP49327 2511 aaKnown RBP20.37■□□□□ 0.85
SNHG6-203ENST00000520944 ATMQ13315 3056 aa20.37■□□□□ 0.85
SNHG6-203ENST00000520944 COL27A1Q8IZC6 1860 aaPredicted RBP20.37■□□□□ 0.85
SNHG6-203ENST00000520944 ERVH48-1M5A8F1 160 aa20.36■□□□□ 0.85
SNHG6-203ENST00000520944 NVLO15381 856 aaKnown RBP20.36■□□□□ 0.85
SNHG6-203ENST00000520944 MAGEA1P43355 309 aa20.36■□□□□ 0.85
SNHG6-203ENST00000520944 TBX2Q13207 712 aaPredicted RBP20.36■□□□□ 0.85
SNHG6-203ENST00000520944 CLN3Q13286 438 aa20.36■□□□□ 0.85
SNHG6-203ENST00000520944 TFDP2Q14188 446 aa20.36■□□□□ 0.85
SNHG6-203ENST00000520944 TAF1BQ53T94 588 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms