RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 IL11RAQ14626 422 aa5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 COG2Q14746 738 aa5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 TRIP6Q15654 476 aaKnown RBP5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 LCE4AQ5TA78 99 aa5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 DCAF12L2Q5VW00 463 aa5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 CST9LP1Q5W188 147 aa5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 TMEM198Q66K66 360 aa5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 DBX2Q6ZNG2 339 aa5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 SDCCAG8Q86SQ7 713 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 PRSS3P2Q8NHM4 247 aa5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 LPGAT1Q92604 370 aa5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 RAB3IPQ96QF0 476 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 MMTAG2Q9BU76 263 aaKnown RBP5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 POLDIP3Q9BY77 421 aaKnown RBP5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 KRTAP9-2Q9BYQ4 174 aa5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 TMEM39BQ9GZU3 492 aa5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 SPATC1LQ9H0A9 340 aa5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 RSPH9Q9H1X1 276 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 PIGMQ9H3S5 423 aa5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 CATSPERBQ9H7T0 1116 aa5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 ACSS1Q9NUB1 689 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 TUBA8Q9NY65 449 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 OR6C3Q9NZP0 311 aa5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 RCOR1Q9UKL0 485 aa5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 TTC7AQ9ULT0 858 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 COG5Q9UP83 839 aa5.34□□□□□ -1.55
HMGB1P46-201ENST00000520062 CPED1A4D0V7 1026 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 MAGEB17A8MXT2 336 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 KCNU1A8MYU2 1149 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 KDM4EB2RXH2 506 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 M0QZ24 198 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 ADAM10O14672 748 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 EPN2O95208 641 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 GH2P01242 217 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 VDRP11473 427 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 ARSBP15848 533 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 IFNAR1P17181 557 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 CTNNA1P35221 906 aaKnown RBP5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 FASLGP48023 281 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 P2RX3P56373 397 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 TMF1P82094 1093 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 SPOCK1Q08629 439 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 DLG2Q15700 870 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 FRG2Q64ET8 278 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 RBPMS2Q6ZRY4 209 aaKnown RBP5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 SHFQ7M4L6 423 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 TC2NQ8N9U0 490 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 XXYLT1Q8NBI6 393 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 OR6J1Q8NGC5 347 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 OR10S1Q8NGN2 331 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 OR1J2Q8NGS2 313 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 LPAR1Q92633 364 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 PTERQ96BW5 349 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 MMP25Q9NPA2 562 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 KRCC1Q9NPI7 259 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 SIRT3Q9NTG7 399 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 ARGLU1Q9NWB6 273 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 IL36RNQ9UBH0 155 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 IL17BQ9UHF5 180 aa5.33□□□□□ -1.56
HMGB1P46-201ENST00000520062 SOS1Q07889 1333 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 ZNF541Q9H0D2 1346 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 PLRG1O43660 514 aaKnown RBP5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 SOX30O94993 753 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 NDUFB8O95169 186 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 FYNP06241 537 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 VPREB1P12018 145 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 HNRNPH1P31943 449 aaKnown RBP5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 CSE1LP55060 971 aaKnown RBP5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 RBP5P82980 135 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 BFSP1Q12934 665 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 ZNF284Q2VY69 593 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 CBWD6Q4V339 395 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 CBWD3Q5JTY5 395 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 KRBOX4Q5JUW0 171 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 PIP4P1Q86T03 277 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 GGNQ86UU5 652 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 AADATQ8N5Z0 425 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 ARFGAP1Q8N6T3 406 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 C16orf52Q8NHV5 167 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 INPP5DQ92835 1189 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 ATP6V1E2Q96A05 226 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 LRFN5Q96NI6 719 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 CDRT15Q96T59 188 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 HAUS8Q9BT25 410 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 ANKRD2Q9GZV1 360 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 SCAND2PQ9GZW5 306 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 ISCUQ9H1K1 167 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 KCNN2Q9H2S1 579 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 SLCO5A1Q9H2Y9 848 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 KCNK15Q9H427 330 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 DNAJC18Q9H819 358 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 MRGBPQ9NV56 204 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 TRMT1Q9NXH9 659 aaKnown RBP5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 STK39Q9UEW8 545 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 TUBE1Q9UJT0 475 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 DBNLQ9UJU6 430 aaKnown RBP5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 ANAPC5Q9UJX4 755 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 PAM16Q9Y3D7 125 aa5.32□□□□□ -1.56
HMGB1P46-201ENST00000520062 ARID1BQ8NFD5 2236 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 TMEM272A0A1B0GTI8 110 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms