RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 ERGIC1Q969X5 290 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 ELSPBP1Q96BH3 223 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 FRG2BQ96QU4 278 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 SMC6Q96SB8 1091 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 CLSTN3Q9BQT9 956 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 NEURL2Q9BR09 285 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 STK31Q9BXU1 1019 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 SLC25A39Q9BZJ4 359 aaPredicted RBP-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 SLC25A32Q9H2D1 315 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 WDR6Q9NNW5 1121 aaKnown RBP-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 TYW1Q9NV66 732 aaKnown RBP-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 MID2Q9UJV3 735 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 GTF3C4Q9UKN8 822 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 ANGPTL3Q9Y5C1 460 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 POGZQ7Z3K3 1410 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 MALRD1Q5VYJ5 2156 aa-0.98□□□□□ -2.57
RNU6-539P-201ENST00000516665 PI4K2BG5E9Z4 385 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 EIF3DO15371 548 aaKnown RBP eCLIP-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 SYNCRIPO60506 623 aaKnown RBP-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 STAM2O75886 525 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 ALDOAP04075 364 aaKnown RBP-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 FAM106CPP0CH98 169 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 THEGLP0DJG4 465 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 FCGR2AP12318 317 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 IL1R1P14778 569 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 CSF2RAP15509 400 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 ZNF14P17017 642 aaPredicted RBP-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 CSTF2P33240 577 aaKnown RBP eCLIP-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 GSTM5P46439 218 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 ARCN1P48444 511 aaKnown RBP-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 LIG4P49917 911 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 FOXL2P58012 376 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 TAS2R50P59544 299 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 MBTD1Q05BQ5 628 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 P2RY6Q15077 328 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 CTF1Q16619 201 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 C9orf129Q5T035 196 aaKnown RBP-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 MFSD7Q6UXD7 560 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 ISCA2Q86U28 154 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 MON1AQ86VX9 555 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 TMC8Q8IU68 726 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 TMEM139Q8IV31 216 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 SFTPA2Q8IWL1 248 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 ZNF433Q8N7K0 673 aaPredicted RBP-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 RBM15BQ8NDT2 890 aaKnown RBP-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 MCPH1Q8NEM0 835 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 FRAT1Q92837 279 aaPredicted RBP-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 NINJ1Q92982 152 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 APIPQ96GX9 242 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 AGAP4Q96P64 663 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 KXD1Q9BQD3 176 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 RHNO1Q9BSD3 238 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 GTPBP4Q9BZE4 634 aaKnown RBP-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 MMP25Q9NPA2 562 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 KCNK9Q9NPC2 374 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 ARMCX3Q9UH62 379 aaPredicted RBP-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 LAS1LQ9Y4W2 734 aaKnown RBP-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 RIPK3Q9Y572 518 aa-0.99□□□□□ -2.57
RNU6-539P-201ENST00000516665 SVILO95425 2214 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 A0A096LPK6 155 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 A0A0U1RQS6 177 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 ZCWPW2A0A1B0GU75 182 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 FAM157AC9JC47 383 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 ANKRD63C9JTQ0 380 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 ZNF195O14628 629 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 CA11O75493 328 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 GJB3O75712 270 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 KBTBD11O94819 623 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 BTF3P20290 206 aaKnown RBP-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 CYP2A7P20853 494 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 OXTRP30559 389 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 KHKP50053 298 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 CACNB3P54284 484 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 GSDMDP57764 484 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 PDE1BQ01064 536 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 CREB5Q02930 508 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 STRN3Q13033 797 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 RRS1Q15050 365 aaKnown RBP-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 CYP4A22Q5TCH4 519 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 TMEM88Q6PEY1 159 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 FIP1L1Q6UN15 594 aaKnown RBP-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 STRA8Q7Z7C7 330 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 ZSCAN2Q7Z7L9 614 aaPredicted RBP-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 KLHDC1Q8N7A1 406 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 MAGEC3Q8TD91 643 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 ARNTL2Q8WYA1 636 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 ERLEC1Q96DZ1 483 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 ZNF597Q96LX8 424 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 TEKT5Q96M29 485 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 SRPK1Q96SB4 655 aaKnown RBP-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 PSMB7Q99436 277 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 HAUS8Q9BT25 410 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 FUCA2Q9BTY2 467 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 FAM126AQ9BYI3 521 aaPredicted RBP-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 PRDM11Q9NQV5 511 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 TEX10Q9NXF1 929 aaPredicted RBP-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 POLLQ9UGP5 575 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 KIAA1217Q5T5P2 1943 aa-1□□□□□ -2.57
RNU6-539P-201ENST00000516665 IGHV4-61A0A0C4DH41 118 aa-1.01□□□□□ -2.57
RNU6-539P-201ENST00000516665 TARSL2A2RTX5 802 aaKnown RBP-1.01□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms