RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 SERINC3Q13530 473 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 RAB32Q13637 225 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 SLC29A2Q14542 456 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 P2RY6Q15077 328 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 PPP6R3Q5H9R7 873 aaPredicted RBP-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 CYP4A22Q5TCH4 519 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 PAMR1Q6UXH9 720 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 PIWIL4Q7Z3Z4 852 aaKnown RBP-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 SYVN1Q86TM6 617 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 TMEM200AQ86VY9 491 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 WDR5BQ86VZ2 330 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 CKAP2LQ8IYA6 745 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 C11orf45Q8TAV5 145 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 TBC1D16Q8TBP0 767 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 ATP8B4Q8TF62 1192 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 LEO1Q8WVC0 666 aaPredicted RBP-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 ARNTL2Q8WYA1 636 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 FRAT1Q92837 279 aaPredicted RBP-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 ERLEC1Q96DZ1 483 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 AGAP4Q96P64 663 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 GMLQ99445 158 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 CLSTN3Q9BQT9 956 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 NEURL2Q9BR09 285 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 LZTS2Q9BRK4 669 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 GTPBP4Q9BZE4 634 aaKnown RBP-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 ZCWPW1Q9H0M4 648 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 C17orf75Q9HAS0 396 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 MMP25Q9NPA2 562 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 A1CFQ9NQ94 594 aaKnown RBP-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 PKP3Q9Y446 797 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 LAS1LQ9Y4W2 734 aaKnown RBP-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 ANGPTL3Q9Y5C1 460 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 ZCWPW2A0A1B0GU75 182 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 FAM157AC9JC47 383 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 ZNF878C9JN71 531 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 PI4K2BG5E9Z4 385 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 ZNF197O14709 1029 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 PCDHGA12O60330 932 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 SYNCRIPO60506 623 aaKnown RBP-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 STAM2O75886 525 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 THEGLP0DJG4 465 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 FCGR2AP12318 317 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 CELP19835 753 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 BTF3P20290 206 aaKnown RBP-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 FOXL2P58012 376 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 MBTD1Q05BQ5 628 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 DHCR24Q15392 516 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 DCAF10Q5QP82 559 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 NCAPH2Q6IBW4 605 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 WDR93Q6P2C0 686 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 MZT2AQ6P582 158 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 ANKS1BQ7Z6G8 1248 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 PTAR1Q7Z6K3 402 aaPredicted RBP-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 DGKHQ86XP1 1220 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 TMC8Q8IU68 726 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 LINC00304Q8N9R0 145 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 RBM15BQ8NDT2 890 aaKnown RBP-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 MCPH1Q8NEM0 835 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 OR2AK2Q8NG84 335 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 OR6B3Q8NGW1 331 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 MAGEC3Q8TD91 643 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 ATOH1Q92858 354 aaPredicted RBP-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 ERGIC1Q969X5 290 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 CALML4Q96GE6 196 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 NT5C1BQ96P26 610 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 FRG2BQ96QU4 278 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 TTC1Q99614 292 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 KXD1Q9BQD3 176 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 RHNO1Q9BSD3 238 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 FAM126AQ9BYI3 521 aaPredicted RBP-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 SLC25A32Q9H2D1 315 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 WDR6Q9NNW5 1121 aaKnown RBP-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 TYW1Q9NV66 732 aaKnown RBP-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 PIH1D1Q9NWS0 290 aaKnown RBP-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 CAMSAP3Q9P1Y5 1249 aaPredicted RBP-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 HCN3Q9P1Z3 774 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 ERVK-11Q9UQG0 969 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 APOBEC2Q9Y235 224 aaKnown RBP-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 OSGIN2Q9Y236 505 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 PCDHGA9Q9Y5G4 932 aaKnown RBP-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 PCDHGA8Q9Y5G5 932 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 PCDHGA7Q9Y5G6 932 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 PCDHGA6Q9Y5G7 932 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 PCDHGA3Q9Y5H0 932 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 CD2APQ9Y5K6 639 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 LTBP1Q14766 1721 aa-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 NSD1Q96L73 2696 aaPredicted RBP-0.87□□□□□ -2.55
RNU6-542P-201ENST00000516405 PCM1Q15154 2024 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 MSGN1A6NI15 193 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 PER2O15055 1255 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 LYPD3O95274 346 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 POP4O95707 220 aaKnown RBP-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 FAM106CPP0CH98 169 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 CSF2RAP15509 400 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 ACHEP22303 614 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 OXTRP30559 389 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 AHRP35869 848 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 GSTM5P46439 218 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 KHKP50053 298 aa-0.88□□□□□ -2.55
RNU6-542P-201ENST00000516405 CLCNKAP51800 687 aa-0.88□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms