RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 Q6P435 159 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 TMED8Q6PL24 325 aaPredicted RBP-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 B3GNT9Q6UX72 402 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 Q6ZPB1 254 aaPredicted RBP-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 FRMD7Q6ZUT3 714 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 LHFPL2Q6ZUX7 228 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 C11orf96Q7Z7L8 435 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 USP37Q86T82 979 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 RNF180Q86T96 592 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 ADCK1Q86TW2 530 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 CARM1Q86X55 608 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 RHPN2Q8IUC4 686 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 PLD3Q8IV08 490 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 RHOT1Q8IXI2 618 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 RNF113BQ8IZP6 322 aaKnown RBP-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 ZNF786Q8N393 782 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 STPG4Q8N801 248 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 ZSWIM2Q8NEG5 633 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 FAM110DQ8TAY7 271 aaPredicted RBP-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 BRIX1Q8TDN6 353 aaKnown RBP-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 TSKUQ8WUA8 353 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 GTF3AQ92664 365 aaKnown RBP-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 KAT2AQ92830 837 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 IL22RA2Q969J5 263 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 PHF21AQ96BD5 680 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 ARSGQ96EG1 525 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 PHYHIPLQ96FC7 376 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 BCANQ96GW7 911 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 SERAC1Q96JX3 654 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 ZNF354BQ96LW1 612 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 C1orf147Q96MC9 270 aaPredicted RBP-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 OR1F2PQ96R84 312 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 MAP3K14Q99558 947 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 GABRG3Q99928 467 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 NUSAP1Q9BXS6 441 aaKnown RBP-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 ACE2Q9BYF1 805 aaPredicted RBP-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 PROK2Q9HC23 129 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 RETNQ9HD89 108 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 MYNNQ9NPC7 610 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 ASNSD1Q9NWL6 643 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 GPATCH2LQ9NWQ4 482 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 WRAP73Q9P2S5 460 aaPredicted RBP-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 PRKAG3Q9UGI9 489 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 TUBE1Q9UJT0 475 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 ACSL5Q9ULC5 683 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 VDAC3Q9Y277 283 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 ANKRD6Q9Y2G4 727 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 KNDC1Q76NI1 1749 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 TIAM2Q8IVF5 1701 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 KIAA2026Q5HYC2 2103 aa-0.62□□□□□ -2.51
SCARNA21.1-201ENST00000515996 PHLPP2Q6ZVD8 1323 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 ADAMTS13Q76LX8 1427 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 RSF1Q96T23 1441 aaPredicted RBP-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 ARAP3Q8WWN8 1544 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 ZNF608Q9ULD9 1512 aaPredicted RBP-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 A0A087WUV0 522 aaPredicted RBP-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 IGKV1D-43A0A0B4J1Z2 117 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 DYTNA2CJ06 578 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 PSMB11A5LHX3 300 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 SAC3D1A6NKF1 404 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 NPIPB5A8MRT5 1133 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 NPIPB4C9JG80 1138 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 PLD2O14939 933 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 PPP1R12AO14974 1030 aaPredicted RBP-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 SCAMP2O15127 329 aaKnown RBP-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 IRAK2O43187 625 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 PHF1O43189 567 aaPredicted RBP-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 CBX6O95503 412 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 CGB3P0DN86 165 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 FOLR2P14207 255 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 AKR1A1P14550 325 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 IGLL1P15814 213 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 TCF3P15923 654 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 PRLRP16471 622 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 BCL3P20749 454 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 TNFAIP3P21580 790 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 MMP8P22894 467 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 TIA1P31483 386 aaKnown RBP eCLIP-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 LSP1P33241 339 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 SOX5P35711 763 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 RPL13AP40429 203 aaKnown RBP-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 NBL1P41271 181 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 VIPR2P41587 438 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 MMP15P51511 669 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 BMXP51813 675 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 BCAT1P54687 386 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 TXNL4AP83876 142 aaKnown RBP-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 FANCCQ00597 558 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 RUNX1Q01196 453 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 MCL1Q07820 350 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 C1orf61Q13536 156 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 TERF2Q15554 542 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 ZRSR2Q15696 482 aaKnown RBP-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 FAM83EQ2M2I3 478 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 SGSM1Q2NKQ1 1148 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 PTCHD3Q3KNS1 767 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 TUBB8Q3ZCM7 444 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 AMOTQ4VCS5 1084 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 CCNYL2Q5T2Q4 361 aa-0.63□□□□□ -2.51
SCARNA21.1-201ENST00000515996 RPUSD3Q6P087 351 aaKnown RBP-0.63□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms