RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 NUDCD3Q8IVD9 361 aa7.47□□□□□ -1.21
PDLIM5-219ENST00000514743 PPP1R13LQ8WUF5 828 aa7.47□□□□□ -1.21
PDLIM5-219ENST00000514743 TP53INP1Q96A56 240 aa7.47□□□□□ -1.21
PDLIM5-219ENST00000514743 RAB7BQ96AH8 199 aa7.47□□□□□ -1.21
PDLIM5-219ENST00000514743 RAD51AP1Q96B01 352 aa7.47□□□□□ -1.21
PDLIM5-219ENST00000514743 C18orf25Q96B23 403 aaPredicted RBP7.47□□□□□ -1.21
PDLIM5-219ENST00000514743 RNF157Q96PX1 679 aa7.47□□□□□ -1.21
PDLIM5-219ENST00000514743 SLC2A13Q96QE2 648 aa7.47□□□□□ -1.21
PDLIM5-219ENST00000514743 PAFAH2Q99487 392 aa7.47□□□□□ -1.21
PDLIM5-219ENST00000514743 GON7Q9BXV9 100 aa7.47□□□□□ -1.21
PDLIM5-219ENST00000514743 SSU72Q9NP77 194 aaKnown RBP7.47□□□□□ -1.21
PDLIM5-219ENST00000514743 ZNF275Q9NSD4 429 aaPredicted RBP7.47□□□□□ -1.21
PDLIM5-219ENST00000514743 TEX264Q9Y6I9 313 aa7.47□□□□□ -1.21
PDLIM5-219ENST00000514743 PIAS3Q9Y6X2 628 aa7.47□□□□□ -1.21
PDLIM5-219ENST00000514743 MOXD2PA6NHM9 499 aa7.46□□□□□ -1.21
PDLIM5-219ENST00000514743 SPARCL1Q14515 664 aa7.46□□□□□ -1.21
PDLIM5-219ENST00000514743 PDK4Q16654 411 aa7.46□□□□□ -1.21
PDLIM5-219ENST00000514743 GEN1Q17RS7 908 aa7.46□□□□□ -1.21
PDLIM5-219ENST00000514743 PERM1Q5SV97 790 aa7.46□□□□□ -1.21
PDLIM5-219ENST00000514743 GARNL3Q5VVW2 1013 aa7.46□□□□□ -1.21
PDLIM5-219ENST00000514743 SLC9A4Q6AI14 798 aa7.46□□□□□ -1.21
PDLIM5-219ENST00000514743 ZNF852Q6ZMS4 543 aa7.46□□□□□ -1.21
PDLIM5-219ENST00000514743 ACOT1Q86TX2 421 aa7.46□□□□□ -1.21
PDLIM5-219ENST00000514743 CDH24Q86UP0 819 aa7.46□□□□□ -1.21
PDLIM5-219ENST00000514743 MICU2Q8IYU8 434 aa7.46□□□□□ -1.21
PDLIM5-219ENST00000514743 PCDH19Q8TAB3 1148 aa7.46□□□□□ -1.21
PDLIM5-219ENST00000514743 UTP15Q8TED0 518 aaKnown RBP7.46□□□□□ -1.21
PDLIM5-219ENST00000514743 CLEC4CQ8WTT0 213 aa7.46□□□□□ -1.21
PDLIM5-219ENST00000514743 TANKQ92844 425 aa7.46□□□□□ -1.21
PDLIM5-219ENST00000514743 FAF2Q96CS3 445 aa7.46□□□□□ -1.21
PDLIM5-219ENST00000514743 TDRD1Q9BXT4 1180 aaKnown RBP7.46□□□□□ -1.21
PDLIM5-219ENST00000514743 B3GNT5Q9BYG0 378 aa7.46□□□□□ -1.21
PDLIM5-219ENST00000514743 GPATCH2LQ9NWQ4 482 aa7.46□□□□□ -1.21
PDLIM5-219ENST00000514743 FBXL21Q9UKT6 434 aa7.46□□□□□ -1.21
PDLIM5-219ENST00000514743 HES2Q9Y543 173 aa7.46□□□□□ -1.21
PDLIM5-219ENST00000514743 GMPPBQ9Y5P6 360 aa7.46□□□□□ -1.21
PDLIM5-219ENST00000514743 COL4A4P53420 1690 aaPredicted RBP7.46□□□□□ -1.21
PDLIM5-219ENST00000514743 OR6C74A6NCV1 312 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 PLOD2O00469 737 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 ACOX3O15254 700 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 TNFAIP8O95379 198 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 NADKO95544 446 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 THRAP10827 490 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 HOXB3P14651 431 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 NCF2P19878 526 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 OR1G1P47890 313 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 RPL34P49207 117 aaKnown RBP7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 GPLD1P80108 840 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 FOXK2Q01167 660 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 TOP3AQ13472 1001 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 PPA1Q15181 289 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 CARTPTQ16568 116 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 SOWAHAQ2M3V2 549 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 PGS1Q32NB8 556 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 DCAF4L1Q3SXM0 396 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 RSBN1Q5VWQ0 802 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 PM20D1Q6GTS8 502 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 SH2D5Q6ZV89 423 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 C7orf31Q8N865 590 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 AVL9Q8NBF6 648 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 BRI3BPQ8WY22 251 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 ZNF641Q96N77 438 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 MAGEB5Q9BZ81 275 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 KLC2Q9H0B6 622 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 FAM49BQ9NUQ9 324 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 RNF19AQ9NV58 838 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 SETD4Q9NVD3 440 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 ZDHHC7Q9NXF8 308 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 DUSP12Q9UNI6 340 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 ENTPD4Q9Y227 616 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 DTX4Q9Y2E6 619 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 F8W036 122 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 SLC7A4O43246 635 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 TSC22D2O75157 780 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 AVILO75366 819 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 RNF224P0DH78 156 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 CA4P22748 312 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 HTR7P34969 479 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 RPL35P42766 123 aaKnown RBP7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 AFF1P51825 1210 aaKnown RBP7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 IL9RQ01113 521 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 SLC6A3Q01959 620 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 GRSF1Q12849 480 aaKnown RBP eCLIP7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 VEPH1Q14D04 833 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 DGKDQ16760 1214 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 ZNF618Q5T7W0 954 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 SLC6A19Q695T7 634 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 HPS6Q86YV9 775 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 TAGAPQ8N103 731 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 EID3Q8N140 333 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 FAM172AQ8WUF8 416 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 LRRN4Q8WUT4 740 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 MTFMTQ96DP5 389 aaKnown RBP7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 TEKT5Q96M29 485 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 SNRNP25Q9BV90 132 aaKnown RBP7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 SAV1Q9H4B6 383 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 NXF3Q9H4D5 531 aaKnown RBP7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 SPATA6Q9NWH7 488 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 TOR4AQ9NXH8 423 aa7.46□□□□□ -1.22
PDLIM5-219ENST00000514743 DNMT3LQ9UJW3 386 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms