RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 C2CD3Q4AC94 2353 aa13.84□□□□□ -0.19
SPCS3-204ENST00000513139 FBN2P35556 2912 aa13.84□□□□□ -0.19
SPCS3-204ENST00000513139 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.83□□□□□ -0.2
SPCS3-204ENST00000513139 GOLGA6L19H0YKK7 550 aa13.83□□□□□ -0.2
SPCS3-204ENST00000513139 PSMD11O00231 422 aa13.83□□□□□ -0.2
SPCS3-204ENST00000513139 INPP4BO15327 924 aa13.83□□□□□ -0.2
SPCS3-204ENST00000513139 SEMA7AO75326 666 aa13.83□□□□□ -0.2
SPCS3-204ENST00000513139 HEXIM1O94992 359 aaKnown RBP13.83□□□□□ -0.2
SPCS3-204ENST00000513139 ANKRD34CP0C6C1 535 aa13.83□□□□□ -0.2
SPCS3-204ENST00000513139 VIPR1P32241 457 aa13.83□□□□□ -0.2
SPCS3-204ENST00000513139 DLSTP36957 453 aa13.83□□□□□ -0.2
SPCS3-204ENST00000513139 PPM1FP49593 454 aaPredicted RBP13.83□□□□□ -0.2
SPCS3-204ENST00000513139 DPTQ07507 201 aa13.83□□□□□ -0.2
SPCS3-204ENST00000513139 ERV3-1Q14264 604 aa13.83□□□□□ -0.2
SPCS3-204ENST00000513139 PYCR3Q53H96 274 aa13.83□□□□□ -0.2
SPCS3-204ENST00000513139 KLHDC7AQ5VTJ3 777 aa13.83□□□□□ -0.2
SPCS3-204ENST00000513139 LYSMD3Q7Z3D4 306 aa13.83□□□□□ -0.2
SPCS3-204ENST00000513139 ZNF761Q86XN6 746 aaPredicted RBP13.83□□□□□ -0.2
SPCS3-204ENST00000513139 ZDHHC16Q969W1 377 aa13.83□□□□□ -0.2
SPCS3-204ENST00000513139 SH3KBP1Q96B97 665 aa13.83□□□□□ -0.2
SPCS3-204ENST00000513139 NAP1L5Q96NT1 182 aaPredicted RBP13.83□□□□□ -0.2
SPCS3-204ENST00000513139 CINPQ9BW66 212 aaPredicted RBP13.83□□□□□ -0.2
SPCS3-204ENST00000513139 ULBP3Q9BZM4 244 aa13.83□□□□□ -0.2
SPCS3-204ENST00000513139 RBSNQ9H1K0 784 aa13.83□□□□□ -0.2
SPCS3-204ENST00000513139 EPB41L1Q9H4G0 881 aa13.83□□□□□ -0.2
SPCS3-204ENST00000513139 SARS2Q9NP81 518 aaKnown RBP13.83□□□□□ -0.2
SPCS3-204ENST00000513139 SIDT1Q9NXL6 827 aaKnown RBP13.83□□□□□ -0.2
SPCS3-204ENST00000513139 NOCTQ9UK39 431 aaKnown RBP13.83□□□□□ -0.2
SPCS3-204ENST00000513139 FZD10Q9ULW2 581 aa13.83□□□□□ -0.2
SPCS3-204ENST00000513139 PCDHGA6Q9Y5G7 932 aa13.83□□□□□ -0.2
SPCS3-204ENST00000513139 POLQO75417 2590 aa13.82□□□□□ -0.2
SPCS3-204ENST00000513139 F8VZ95 297 aa13.82□□□□□ -0.2
SPCS3-204ENST00000513139 HTRA2O43464 458 aaPredicted RBP13.82□□□□□ -0.2
SPCS3-204ENST00000513139 SOCS5O75159 536 aa13.82□□□□□ -0.2
SPCS3-204ENST00000513139 FURINP09958 794 aa13.82□□□□□ -0.2
SPCS3-204ENST00000513139 UCHL3P15374 230 aa13.82□□□□□ -0.2
SPCS3-204ENST00000513139 GPD1P21695 349 aa13.82□□□□□ -0.2
SPCS3-204ENST00000513139 ETV3P41162 512 aa13.82□□□□□ -0.2
SPCS3-204ENST00000513139 PAPOLAP51003 745 aaKnown RBP13.82□□□□□ -0.2
SPCS3-204ENST00000513139 SCNN1BP51168 640 aa13.82□□□□□ -0.2
SPCS3-204ENST00000513139 RENBPP51606 427 aa13.82□□□□□ -0.2
SPCS3-204ENST00000513139 CDR2Q01850 454 aa13.82□□□□□ -0.2
SPCS3-204ENST00000513139 HHEXQ03014 270 aa13.82□□□□□ -0.2
SPCS3-204ENST00000513139 RAET1GQ6H3X3 334 aa13.82□□□□□ -0.2
SPCS3-204ENST00000513139 WDR59Q6PJI9 974 aa13.82□□□□□ -0.2
SPCS3-204ENST00000513139 C6orf15Q6UXA7 325 aaPredicted RBP13.82□□□□□ -0.2
SPCS3-204ENST00000513139 TRIM72Q6ZMU5 477 aa13.82□□□□□ -0.2
SPCS3-204ENST00000513139 MAMDC2Q7Z304 686 aaPredicted RBP13.82□□□□□ -0.2
SPCS3-204ENST00000513139 TICAM1Q8IUC6 712 aa13.82□□□□□ -0.2
SPCS3-204ENST00000513139 LZTR1Q8N653 840 aa13.82□□□□□ -0.2
SPCS3-204ENST00000513139 ANKRD20A12PQ8NF67 263 aa13.82□□□□□ -0.2
SPCS3-204ENST00000513139 NCSTNQ92542 709 aa13.82□□□□□ -0.2
SPCS3-204ENST00000513139 PSKH2Q96QS6 385 aa13.82□□□□□ -0.2
SPCS3-204ENST00000513139 C11orf70Q9BRQ4 267 aa13.82□□□□□ -0.2
SPCS3-204ENST00000513139 STK33Q9BYT3 514 aa13.82□□□□□ -0.2
SPCS3-204ENST00000513139 SLC39A8Q9C0K1 460 aa13.82□□□□□ -0.2
SPCS3-204ENST00000513139 STN1Q9H668 368 aaKnown RBP13.82□□□□□ -0.2
SPCS3-204ENST00000513139 CROTQ9UKG9 612 aa13.82□□□□□ -0.2
SPCS3-204ENST00000513139 PLEKHM1Q9Y4G2 1056 aa13.82□□□□□ -0.2
SPCS3-204ENST00000513139 MAP4K5Q9Y4K4 846 aa13.82□□□□□ -0.2
SPCS3-204ENST00000513139 MAP3K6O95382 1288 aa13.81□□□□□ -0.2
SPCS3-204ENST00000513139 RNF224P0DH78 156 aa13.81□□□□□ -0.2
SPCS3-204ENST00000513139 CYP2A6P11509 494 aaPredicted RBP13.81□□□□□ -0.2
SPCS3-204ENST00000513139 KLK7P49862 253 aa13.81□□□□□ -0.2
SPCS3-204ENST00000513139 TPI1P60174 286 aa13.81□□□□□ -0.2
SPCS3-204ENST00000513139 TPM4P67936 248 aa13.81□□□□□ -0.2
SPCS3-204ENST00000513139 IL10RBQ08334 325 aa13.81□□□□□ -0.2
SPCS3-204ENST00000513139 PTP4A2Q12974 167 aa13.81□□□□□ -0.2
SPCS3-204ENST00000513139 SCYL2Q6P3W7 929 aa13.81□□□□□ -0.2
SPCS3-204ENST00000513139 ADAMTSL4Q6UY14 1074 aa13.81□□□□□ -0.2
SPCS3-204ENST00000513139 Q6ZVL8 140 aa13.81□□□□□ -0.2
SPCS3-204ENST00000513139 HSD11B1LQ7Z5J1 315 aa13.81□□□□□ -0.2
SPCS3-204ENST00000513139 NLRP8Q86W28 1048 aa13.81□□□□□ -0.2
SPCS3-204ENST00000513139 PLXDC1Q8IUK5 500 aa13.81□□□□□ -0.2
SPCS3-204ENST00000513139 C3orf20Q8ND61 904 aa13.81□□□□□ -0.2
SPCS3-204ENST00000513139 SLC30A5Q8TAD4 765 aa13.81□□□□□ -0.2
SPCS3-204ENST00000513139 NSMCE3Q96MG7 304 aa13.81□□□□□ -0.2
SPCS3-204ENST00000513139 SELENOOQ9BVL4 669 aa13.81□□□□□ -0.2
SPCS3-204ENST00000513139 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.81□□□□□ -0.2
SPCS3-204ENST00000513139 PHTF1Q9UMS5 762 aa13.81□□□□□ -0.2
SPCS3-204ENST00000513139 MN1Q10571 1320 aaPredicted RBP13.81□□□□□ -0.2
SPCS3-204ENST00000513139 TRBV23OR9-2A0A075B6M9 112 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 A1L4Q6 167 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 GOLGA6CA6NDK9 693 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 GOLGA6BA6NDN3 693 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 GOLGA6L3A6NEY3 463 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 SIGLEC16A6NMB1 481 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 LGALS16A8MUM7 142 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 EIF3CLB5ME19 914 aaKnown RBP13.8□□□□□ -0.2
SPCS3-204ENST00000513139 CREG1O75629 220 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 SERPINC1P01008 464 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 PDGFAP04085 211 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 PYGLP06737 847 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 TPM2P07951 284 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 GOLGA6DP0CG33 693 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 DCTP40126 519 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 GPR1P46091 355 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 ZNF143P52747 638 aaPredicted RBP13.8□□□□□ -0.2
SPCS3-204ENST00000513139 FANCCQ00597 558 aa13.8□□□□□ -0.2
SPCS3-204ENST00000513139 FMO1Q01740 532 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms