RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 TTC1Q99614 292 aa9.09□□□□□ -0.95
NR1I3-230ENST00000511944 KXD1Q9BQD3 176 aa9.09□□□□□ -0.95
NR1I3-230ENST00000511944 TRIM56Q9BRZ2 755 aaKnown RBP9.09□□□□□ -0.95
NR1I3-230ENST00000511944 APOL5Q9BWW9 433 aa9.09□□□□□ -0.95
NR1I3-230ENST00000511944 PHF7Q9BWX1 381 aaPredicted RBP9.09□□□□□ -0.95
NR1I3-230ENST00000511944 CAPS2Q9BXY5 557 aa9.09□□□□□ -0.95
NR1I3-230ENST00000511944 TNKS2Q9H2K2 1166 aa9.09□□□□□ -0.95
NR1I3-230ENST00000511944 INTS9Q9NV88 658 aaKnown RBP9.09□□□□□ -0.95
NR1I3-230ENST00000511944 KCTD5Q9NXV2 234 aa9.09□□□□□ -0.95
NR1I3-230ENST00000511944 THAP10Q9P2Z0 257 aaPredicted RBP9.09□□□□□ -0.95
NR1I3-230ENST00000511944 IL36AQ9UHA7 158 aa9.09□□□□□ -0.95
NR1I3-230ENST00000511944 SLCO3A1Q9UIG8 710 aa9.09□□□□□ -0.95
NR1I3-230ENST00000511944 ANKRD6Q9Y2G4 727 aa9.09□□□□□ -0.95
NR1I3-230ENST00000511944 ZNF711Q9Y462 761 aa9.09□□□□□ -0.95
NR1I3-230ENST00000511944 PSAT1Q9Y617 370 aa9.09□□□□□ -0.95
NR1I3-230ENST00000511944 NUMBLQ9Y6R0 609 aa9.09□□□□□ -0.95
NR1I3-230ENST00000511944 LAMA2P24043 3122 aaKnown RBP9.08□□□□□ -0.96
NR1I3-230ENST00000511944 HMX2A2RU54 273 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 OTOL1A6NHN0 477 aaPredicted RBP9.08□□□□□ -0.96
NR1I3-230ENST00000511944 UPK3BL1B0FP48 263 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 UPK3BL2E5RIL1 263 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 MBTPS2O43462 519 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 GLRA3O75311 464 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 GJB3O75712 270 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 APOA4P06727 396 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 CELA2BP08218 269 aaPredicted RBP9.08□□□□□ -0.96
NR1I3-230ENST00000511944 ITGB7P26010 798 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 CRABP2P29373 138 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 CRHR1P34998 444 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 SLC1A2P43004 574 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 MAP2K3P46734 347 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 TTPAP49638 278 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 KPNA2P52292 529 aaKnown RBP9.08□□□□□ -0.96
NR1I3-230ENST00000511944 STC1P52823 247 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 IL9RQ01113 521 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 CCDC15Q0P6D6 951 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 ZKSCAN8Q15776 578 aaPredicted RBP9.08□□□□□ -0.96
NR1I3-230ENST00000511944 CDKN3Q16667 212 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 GPR33Q49SQ1 333 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 FNDC3BQ53EP0 1204 aaKnown RBP9.08□□□□□ -0.96
NR1I3-230ENST00000511944 FAM182AQ5T1J6 154 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 FSTL4Q6MZW2 842 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 CES3Q6UWW8 571 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 KYAT3Q6YP21 454 aaKnown RBP9.08□□□□□ -0.96
NR1I3-230ENST00000511944 RGS9BPQ6ZS82 235 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 TRMT11Q7Z4G4 463 aaKnown RBP9.08□□□□□ -0.96
NR1I3-230ENST00000511944 NAT16Q8N8M0 369 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 MDGA1Q8NFP4 955 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 RAB3IL1Q8TBN0 382 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 GRIN3AQ8TCU5 1115 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 DENND1AQ8TEH3 1009 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 OR8D1Q8WZ84 308 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 HDAC10Q969S8 669 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 RAB7BQ96AH8 199 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 CDKN2AIPNLQ96HQ2 116 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 ZFYVE19Q96K21 471 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 DNAJC1Q96KC8 554 aaKnown RBP9.08□□□□□ -0.96
NR1I3-230ENST00000511944 GPR63Q9BZJ6 419 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 PLA2G2FQ9BZM2 168 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 IQCGQ9H095 443 aaKnown RBP9.08□□□□□ -0.96
NR1I3-230ENST00000511944 ZDHHC6Q9H6R6 413 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 BRD9Q9H8M2 597 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 ZFYVE1Q9HBF4 777 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 IARS2Q9NSE4 1012 aaKnown RBP9.08□□□□□ -0.96
NR1I3-230ENST00000511944 CATSPERZQ9NTU4 200 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 SLC2A6Q9UGQ3 507 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 EGFL7Q9UHF1 273 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 DCDC2Q9UHG0 476 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 GGT7Q9UJ14 662 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 MID2Q9UJV3 735 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 GRID1Q9ULK0 1009 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 SPO11Q9Y5K1 396 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 ARL5AQ9Y689 179 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 DOCK6Q96HP0 2047 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 DOCK8Q8NF50 2099 aa9.08□□□□□ -0.96
NR1I3-230ENST00000511944 MIA3Q5JRA6 1907 aa9.07□□□□□ -0.96
NR1I3-230ENST00000511944 TRBV5-4A0A0C4DH59 114 aa9.07□□□□□ -0.96
NR1I3-230ENST00000511944 TBC1D3BA6NDS4 549 aa9.07□□□□□ -0.96
NR1I3-230ENST00000511944 AGAP14A8MT82 685 aa9.07□□□□□ -0.96
NR1I3-230ENST00000511944 TTC34A8MYJ7 566 aa9.07□□□□□ -0.96
NR1I3-230ENST00000511944 PRRT4C9JH25 899 aa9.07□□□□□ -0.96
NR1I3-230ENST00000511944 C1QTNF3-AMACRE9PGA6 284 aa9.07□□□□□ -0.96
NR1I3-230ENST00000511944 COPEO14579 308 aa9.07□□□□□ -0.96
NR1I3-230ENST00000511944 CD3EAPO15446 510 aaKnown RBP9.07□□□□□ -0.96
NR1I3-230ENST00000511944 PIGNO95427 931 aa9.07□□□□□ -0.96
NR1I3-230ENST00000511944 AHSGP02765 367 aa9.07□□□□□ -0.96
NR1I3-230ENST00000511944 ALDOAP04075 364 aaKnown RBP9.07□□□□□ -0.96
NR1I3-230ENST00000511944 DHRS4L1P0CG22 281 aa9.07□□□□□ -0.96
NR1I3-230ENST00000511944 CHN1P15882 459 aa9.07□□□□□ -0.96
NR1I3-230ENST00000511944 DRD1P21728 446 aa9.07□□□□□ -0.96
NR1I3-230ENST00000511944 VIPR1P32241 457 aa9.07□□□□□ -0.96
NR1I3-230ENST00000511944 FOXN2P32314 431 aa9.07□□□□□ -0.96
NR1I3-230ENST00000511944 NEK3P51956 506 aa9.07□□□□□ -0.96
NR1I3-230ENST00000511944 CBX1P83916 185 aa9.07□□□□□ -0.96
NR1I3-230ENST00000511944 CACNG1Q06432 222 aa9.07□□□□□ -0.96
NR1I3-230ENST00000511944 ELP6Q0PNE2 266 aa9.07□□□□□ -0.96
NR1I3-230ENST00000511944 GRM2Q14416 872 aa9.07□□□□□ -0.96
NR1I3-230ENST00000511944 ZNF234Q14588 700 aa9.07□□□□□ -0.96
NR1I3-230ENST00000511944 SMAD2Q15796 467 aaKnown RBP9.07□□□□□ -0.96
NR1I3-230ENST00000511944 TSNAXIP1Q2TAA8 658 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms