RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 SSTR2P30874 369 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 HOXC9P31274 260 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 ACSL1P33121 698 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 EIF2DP41214 584 aaKnown RBP3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 CDKN2AP42771 156 aaKnown RBP3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 MRPS34P82930 218 aaKnown RBP3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 FOXM1Q08050 763 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 GRSF1Q12849 480 aaKnown RBP eCLIP3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 STK4Q13043 487 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 DHX34Q14147 1143 aaKnown RBP3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 KRBA2Q6ZNG9 492 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 BRINP3Q76B58 766 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 HIST3H2AQ7L7L0 130 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 BHLHA9Q7RTU4 235 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 POC5Q8NA72 575 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 NEXN-AS1Q8NBZ9 246 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 TMED6Q8WW62 240 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 MIB2Q96AX9 1013 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 ZBTB9Q96C00 473 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 CAMK1GQ96NX5 476 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 OR2A14Q96R47 310 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 SEZ6LQ9BYH1 1024 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 KCNN2Q9H2S1 579 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 MMP25Q9NPA2 562 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 SUCLA2Q9P2R7 463 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 COPG2Q9UBF2 871 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 FBXW11Q9UKB1 542 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 CMAHPQ9Y471 501 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 SNX8Q9Y5X2 465 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 KAT6BQ8WYB5 2073 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 CACNA1IQ9P0X4 2223 aa3.42□□□□□ -1.86
TRAPPC11-207ENST00000511409 KANSL1LA0AUZ9 987 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 HS3ST1O14792 307 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 SPINT2O43291 252 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 KCNK5O95279 499 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 ACTN1P12814 892 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 PON1P27169 355 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 MSH2P43246 934 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 PEX5P50542 639 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 HNRNPH2P55795 449 aaKnown RBP3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 LINC00205P59089 165 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 NUCB1Q02818 461 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 MAD2L1Q13257 205 aaPredicted RBP3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 KCNC3Q14003 757 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 KCTD2Q14681 263 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 PCGF3Q3KNV8 242 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 ATP13A5Q4VNC0 1218 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 ZNF805Q5CZA5 627 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 KCNT1Q5JUK3 1230 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 DCST1Q5T197 706 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 TMEM198Q66K66 360 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 RGMBQ6NW40 437 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 C8orf82Q6P1X6 216 aaPredicted RBP3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 CFAP77Q6ZQR2 320 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 C9orf47Q6ZRZ4 202 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 CCDC190Q86UF4 302 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 FOXRED2Q8IWF2 684 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 ADHFE1Q8IWW8 467 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 PGBD5Q8N414 524 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 Q8N9P0 234 aaPredicted RBP3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 OR1J2Q8NGS2 313 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 HMGCLL1Q8TB92 370 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 HM13Q8TCT9 377 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 FAM216AQ8WUB2 273 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 APBB2Q92870 758 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 NEUROG1Q92886 237 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 GRAMD2BQ96HH9 432 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 C3orf30Q96M34 536 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 CMKLR1Q99788 373 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 CENPOQ9BU64 300 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 C1QTNF1Q9BXJ1 281 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 HRH4Q9H3N8 390 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 SEBOXQ9HB31 216 aaPredicted RBP3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 MRPL15Q9P015 296 aaKnown RBP3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 STK39Q9UEW8 545 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 CHORDC1Q9UHD1 332 aaPredicted RBP3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 TINAGQ9UJW2 476 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 LOXL2Q9Y4K0 774 aa3.41□□□□□ -1.86
TRAPPC11-207ENST00000511409 IGLV5-52A0A0A0MRZ9 124 aa3.4□□□□□ -1.87
TRAPPC11-207ENST00000511409 A0A0U1RQJ8 604 aa3.4□□□□□ -1.87
TRAPPC11-207ENST00000511409 LRRC72A6NJI9 287 aa3.4□□□□□ -1.87
TRAPPC11-207ENST00000511409 EIF4E1BA6NMX2 242 aaKnown RBP3.4□□□□□ -1.87
TRAPPC11-207ENST00000511409 DAB1O75553 588 aa3.4□□□□□ -1.87
TRAPPC11-207ENST00000511409 ALPLP05186 524 aa3.4□□□□□ -1.87
TRAPPC11-207ENST00000511409 ICAM1P05362 532 aa3.4□□□□□ -1.87
TRAPPC11-207ENST00000511409 IGHV4-30-4P0DP06 118 aa3.4□□□□□ -1.87
TRAPPC11-207ENST00000511409 SNHG28P0DPA3 235 aa3.4□□□□□ -1.87
TRAPPC11-207ENST00000511409 AKR1B1P15121 316 aa3.4□□□□□ -1.87
TRAPPC11-207ENST00000511409 HOXA13P31271 388 aaPredicted RBP3.4□□□□□ -1.87
TRAPPC11-207ENST00000511409 KRT20P35900 424 aa3.4□□□□□ -1.87
TRAPPC11-207ENST00000511409 NNMTP40261 264 aa3.4□□□□□ -1.87
TRAPPC11-207ENST00000511409 RAD52P43351 418 aa3.4□□□□□ -1.87
TRAPPC11-207ENST00000511409 NRIP1P48552 1158 aa3.4□□□□□ -1.87
TRAPPC11-207ENST00000511409 HTR6P50406 440 aa3.4□□□□□ -1.87
TRAPPC11-207ENST00000511409 CLCNKAP51800 687 aa3.4□□□□□ -1.87
TRAPPC11-207ENST00000511409 RRP1P56182 461 aaKnown RBP3.4□□□□□ -1.87
TRAPPC11-207ENST00000511409 SEC61BP60468 96 aaKnown RBP3.4□□□□□ -1.87
TRAPPC11-207ENST00000511409 PSMC6P62333 389 aa3.4□□□□□ -1.87
TRAPPC11-207ENST00000511409 BNC1Q01954 994 aa3.4□□□□□ -1.87
TRAPPC11-207ENST00000511409 SREBF2Q12772 1141 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms