RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 IL10RBQ08334 325 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 TAF10Q12962 218 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 FLOT2Q14254 428 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 ACAP2Q15057 778 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 MGAT5BQ3V5L5 792 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 PARP15Q460N3 678 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 SIRPB2Q5JXA9 342 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 CIR1Q86X95 450 aaPredicted RBP7.5□□□□□ -1.21
CAST-228ENST00000509903 SLC22A9Q8IVM8 553 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 TTC9BQ8N6N2 239 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 ZSCAN1Q8NBB4 408 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 GDPD5Q8WTR4 605 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 IGSF8Q969P0 613 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 PPP2R3CQ969Q6 453 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 NXPE3Q969Y0 559 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 GLT1D1Q96MS3 346 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 CDRT15Q96T59 188 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 SEMA3CQ99985 751 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 KLHL4Q9C0H6 718 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 POLR1EQ9GZS1 481 aaKnown RBP7.5□□□□□ -1.21
CAST-228ENST00000509903 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.5□□□□□ -1.21
CAST-228ENST00000509903 MFSD1Q9H3U5 465 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 ZNF385DQ9H6B1 395 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 WDR41Q9HAD4 459 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 EFCAB1Q9HAE3 211 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 MRGBPQ9NV56 204 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.5□□□□□ -1.213e-6■□□□□ 10.1
CAST-228ENST00000509903 PACSIN3Q9UKS6 424 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 MAPRE3Q9UPY8 281 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 VWA7Q9Y334 891 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 COPG1Q9Y678 874 aaKnown RBP7.5□□□□□ -1.21
CAST-228ENST00000509903 PLXNA3P51805 1871 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 IGLV3-10A0A075B6K4 115 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 SDHDO14521 159 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 MMP2P08253 660 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 CD1EP15812 388 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 PEX2P28328 305 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 RNF144AP50876 292 aaPredicted RBP7.5□□□□□ -1.21
CAST-228ENST00000509903 THOP1P52888 689 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 ACLYP53396 1101 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 SATB1Q01826 763 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 SULT2A1Q06520 285 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 LAMB3Q13751 1172 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 GRAMD1BQ3KR37 738 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 ACBD5Q5T8D3 534 aaPredicted RBP7.5□□□□□ -1.21
CAST-228ENST00000509903 LPCAT4Q643R3 524 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 GALNT7Q86SF2 657 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 LDB1Q86U70 411 aaPredicted RBP7.5□□□□□ -1.21
CAST-228ENST00000509903 CUZD1Q86UP6 607 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 KBTBD6Q86V97 674 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 PGAM4Q8N0Y7 254 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 TEX26Q8N6G2 289 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 BLOC1S5Q8TDH9 187 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 LINC01599Q8WXQ3 324 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 PHF21BQ96EK2 531 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 TMA16Q96EY4 203 aaKnown RBP7.5□□□□□ -1.21
CAST-228ENST00000509903 YIPF3Q9GZM5 350 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 TMEM39AQ9NV64 488 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.5□□□□□ -1.211e-6■■■■■ 32.4
CAST-228ENST00000509903 ADAMTS6Q9UKP5 1117 aa7.5□□□□□ -1.21
CAST-228ENST00000509903 A0A1W2PQU0 124 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 FAM92AA1XBS5 289 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 MROH6A6NGR9 719 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 OR51F1A6NGY5 319 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 FAM155AB1AL88 458 aaPredicted RBP7.49□□□□□ -1.21
CAST-228ENST00000509903 GPC4O75487 556 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 GLP2RO95838 553 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 SLC4A1P02730 911 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 FGF1P05230 155 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 ATXN1LP0C7T5 689 aaKnown RBP7.49□□□□□ -1.21
CAST-228ENST00000509903 HLA-DPA1P20036 260 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 KCNA5P22460 613 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 PBX3P40426 434 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 MAPKAPK2P49137 400 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 PKNOX1P55347 436 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 YBEYP58557 167 aaPredicted RBP7.49□□□□□ -1.21
CAST-228ENST00000509903 XIAPP98170 497 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 ILF2Q12905 390 aaKnown RBP7.49□□□□□ -1.21
CAST-228ENST00000509903 MSLNQ13421 630 aaPredicted RBP7.49□□□□□ -1.21
CAST-228ENST00000509903 MAPRE2Q15555 327 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 SLC14A2Q15849 920 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 GPR158Q5T848 1215 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 FAM45BPQ6NSW5 357 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 MRNIPQ6NTE8 343 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 RNF111Q6ZNA4 994 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 FGD2Q7Z6J4 655 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 PDSS2Q86YH6 399 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 BBS5Q8N3I7 341 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 PGBD5Q8N414 524 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 PNPLA1Q8N8W4 532 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 ARRDC2Q8TBH0 407 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 FAM45AQ8TCE6 357 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 SPPL2BQ8TCT7 592 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 ANKRD49Q8WVL7 239 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 JPH3Q8WXH2 748 aaPredicted RBP7.49□□□□□ -1.21
CAST-228ENST00000509903 GATA6Q92908 595 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 USP13Q92995 863 aaPredicted RBP7.49□□□□□ -1.21
CAST-228ENST00000509903 MAELQ96JY0 434 aaKnown RBP7.49□□□□□ -1.21
CAST-228ENST00000509903 B3GALT6Q96L58 329 aa7.49□□□□□ -1.21
CAST-228ENST00000509903 UBXN10Q96LJ8 280 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms