RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 PTPRNQ16849 979 aa17.58■□□□□ 0.4
SFXN1-208ENST00000507823 PLEKHG6Q3KR16 790 aa17.58■□□□□ 0.4
SFXN1-208ENST00000507823 TLDC1Q6P9B6 456 aa17.58■□□□□ 0.4
SFXN1-208ENST00000507823 MYLK4Q86YV6 388 aaPredicted RBP17.58■□□□□ 0.4
SFXN1-208ENST00000507823 ELMOD1Q8N336 334 aa17.58■□□□□ 0.4
SFXN1-208ENST00000507823 EFHBQ8N7U6 833 aa17.58■□□□□ 0.4
SFXN1-208ENST00000507823 STAG3L4Q8TBR4 150 aa17.58■□□□□ 0.4
SFXN1-208ENST00000507823 KCNJ9Q92806 393 aa17.58■□□□□ 0.4
SFXN1-208ENST00000507823 TACO1Q9BSH4 297 aaKnown RBP17.58■□□□□ 0.4
SFXN1-208ENST00000507823 CCDC68Q9H2F9 335 aa17.58■□□□□ 0.4
SFXN1-208ENST00000507823 CLEC4EQ9ULY5 219 aa17.58■□□□□ 0.4
SFXN1-208ENST00000507823 INSL6Q9Y581 213 aa17.58■□□□□ 0.4
SFXN1-208ENST00000507823 UBA6A0AVT1 1052 aaPredicted RBP17.57■□□□□ 0.4
SFXN1-208ENST00000507823 SMAD6O43541 496 aaKnown RBP17.57■□□□□ 0.4
SFXN1-208ENST00000507823 CACNG1Q06432 222 aa17.57■□□□□ 0.4
SFXN1-208ENST00000507823 RAD51Q06609 339 aa17.57■□□□□ 0.4
SFXN1-208ENST00000507823 RIPOR1Q6ZS17 1223 aa17.57■□□□□ 0.4
SFXN1-208ENST00000507823 STK40Q8N2I9 435 aa17.57■□□□□ 0.4
SFXN1-208ENST00000507823 GCNAQ96QF7 691 aa17.57■□□□□ 0.4
SFXN1-208ENST00000507823 INTS6Q9UL03 887 aaKnown RBP17.57■□□□□ 0.4
SFXN1-208ENST00000507823 TRAF6Q9Y4K3 522 aa17.57■□□□□ 0.4
SFXN1-208ENST00000507823 LRRC42Q9Y546 428 aa17.57■□□□□ 0.4
SFXN1-208ENST00000507823 A0A1W2PRU2 124 aa17.57■□□□□ 0.4
SFXN1-208ENST00000507823 KRT36O76013 467 aa17.57■□□□□ 0.4
SFXN1-208ENST00000507823 PRAMEF12O95522 483 aa17.57■□□□□ 0.4
SFXN1-208ENST00000507823 ESR1P03372 595 aa17.57■□□□□ 0.4
SFXN1-208ENST00000507823 UGT3A2Q3SY77 523 aa17.57■□□□□ 0.4
SFXN1-208ENST00000507823 CMPK2Q5EBM0 449 aa17.57■□□□□ 0.4
SFXN1-208ENST00000507823 C6orf163Q5TEZ5 329 aa17.57■□□□□ 0.4
SFXN1-208ENST00000507823 CYHR1Q6ZMK1 362 aa17.57■□□□□ 0.4
SFXN1-208ENST00000507823 GPR21Q99679 349 aa17.57■□□□□ 0.4
SFXN1-208ENST00000507823 EMILIN2Q9BXX0 1053 aa17.57■□□□□ 0.4
SFXN1-208ENST00000507823 ASAH2Q9NR71 780 aa17.57■□□□□ 0.4
SFXN1-208ENST00000507823 STOML1Q9UBI4 398 aa17.57■□□□□ 0.4
SFXN1-208ENST00000507823 COPG1Q9Y678 874 aaKnown RBP17.57■□□□□ 0.4
SFXN1-208ENST00000507823 A0A0J9YYE9 177 aa17.56■□□□□ 0.4
SFXN1-208ENST00000507823 SOBPA7XYQ1 873 aa17.56■□□□□ 0.4
SFXN1-208ENST00000507823 TRBC1P01850 177 aa17.56■□□□□ 0.4
SFXN1-208ENST00000507823 DDX6P26196 483 aaKnown RBP eCLIP17.56■□□□□ 0.4
SFXN1-208ENST00000507823 PTPRRQ15256 657 aa17.56■□□□□ 0.4
SFXN1-208ENST00000507823 TMEM198Q66K66 360 aa17.56■□□□□ 0.4
SFXN1-208ENST00000507823 CERS6Q6ZMG9 384 aa17.56■□□□□ 0.4
SFXN1-208ENST00000507823 PTGR2Q8N8N7 351 aaPredicted RBP17.56■□□□□ 0.4
SFXN1-208ENST00000507823 ISG20Q96AZ6 181 aaKnown RBP17.56■□□□□ 0.4
SFXN1-208ENST00000507823 LYSMD1Q96S90 227 aa17.56■□□□□ 0.4
SFXN1-208ENST00000507823 CDH22Q9UJ99 828 aa17.56■□□□□ 0.4
SFXN1-208ENST00000507823 MCM8Q9UJA3 840 aa17.56■□□□□ 0.4
SFXN1-208ENST00000507823 PKP3Q9Y446 797 aa17.56■□□□□ 0.4
SFXN1-208ENST00000507823 LOC100653049A0A140TA62 436 aa17.56■□□□□ 0.4
SFXN1-208ENST00000507823 UBXN8O00124 270 aa17.56■□□□□ 0.4
SFXN1-208ENST00000507823 GAPDHSO14556 408 aaPredicted RBP17.56■□□□□ 0.4
SFXN1-208ENST00000507823 VPS26AO75436 327 aa17.56■□□□□ 0.4
SFXN1-208ENST00000507823 KRT34O76011 436 aa17.56■□□□□ 0.4
SFXN1-208ENST00000507823 FGF19O95750 216 aa17.56■□□□□ 0.4
SFXN1-208ENST00000507823 CD70P32970 193 aa17.56■□□□□ 0.4
SFXN1-208ENST00000507823 C1QTNF8P60827 252 aa17.56■□□□□ 0.4
SFXN1-208ENST00000507823 CUL3Q13618 768 aa17.56■□□□□ 0.4
SFXN1-208ENST00000507823 RCN1Q15293 331 aa17.56■□□□□ 0.4
SFXN1-208ENST00000507823 LYSMD3Q7Z3D4 306 aa17.56■□□□□ 0.4
SFXN1-208ENST00000507823 CAMK1DQ8IU85 385 aa17.56■□□□□ 0.4
SFXN1-208ENST00000507823 CD200R1Q8TD46 325 aa17.56■□□□□ 0.4
SFXN1-208ENST00000507823 IKZF3Q9UKT9 509 aa17.56■□□□□ 0.4
SFXN1-208ENST00000507823 TMCO1Q9UM00 188 aa17.56■□□□□ 0.4
SFXN1-208ENST00000507823 PRPF19Q9UMS4 504 aaKnown RBP17.56■□□□□ 0.4
SFXN1-208ENST00000507823 STX16-NPEPL1H3BU86 382 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 STX16O14662 325 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 SUPT7LO94864 414 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 GLUD1P00367 558 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 RPS3P23396 243 aaKnown RBP eCLIP17.55■□□□□ 0.41e-6■□□□□ 11.3
SFXN1-208ENST00000507823 CCR2P41597 374 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 PTDSS1P48651 473 aaKnown RBP17.55■□□□□ 0.4
SFXN1-208ENST00000507823 EPHB1P54762 984 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 BCL2L1Q07817 233 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 RAB44Q7Z6P3 723 aaPredicted RBP17.55■□□□□ 0.4
SFXN1-208ENST00000507823 FUBP1Q96AE4 644 aaKnown RBP17.55■□□□□ 0.4
SFXN1-208ENST00000507823 PDLIM5Q96HC4 596 aaKnown RBP17.55■□□□□ 0.4
SFXN1-208ENST00000507823 CATSPER2Q96P56 530 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 BPIFA1Q9NP55 256 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 EVLQ9UI08 416 aaPredicted RBP17.55■□□□□ 0.4
SFXN1-208ENST00000507823 FAM50BQ9Y247 325 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 HS3ST2Q9Y278 367 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 PCDHB1Q9Y5F3 818 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 TRBV5-4A0A0C4DH59 114 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 OR1I1O60431 355 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 CDK14O94921 469 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 CD1EP15812 388 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 MTTPP55157 894 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 ERVFC1P60507 584 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 SLC34A1Q06495 639 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 CYLC2Q14093 348 aaPredicted RBP17.55■□□□□ 0.4
SFXN1-208ENST00000507823 AAGABQ6PD74 315 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 RPS27LQ71UM5 84 aaKnown RBP17.55■□□□□ 0.4
SFXN1-208ENST00000507823 SNX32Q86XE0 403 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 CLYBLQ8N0X4 340 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 MRPL43Q8N983 215 aaKnown RBP17.55■□□□□ 0.4
SFXN1-208ENST00000507823 GIMAP7Q8NHV1 300 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 SHKBP1Q8TBC3 707 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 STMN2Q93045 179 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 PPP1R36Q96LQ0 422 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 SLC30A3Q99726 388 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms